RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 MLPHQ9BV36 600 aaPredicted RBP11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 ASB8Q9H765 288 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 SP140LQ9H930 580 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 POMPQ9Y244 141 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 HCFC2Q9Y5Z7 792 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 MYO9BQ13459 2157 aa11.72□□□□□ -0.53
SYNGAP1-201ENST00000293748 MYH11P35749 1972 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 MTRF1O75570 445 aaKnown RBP11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 SERPINB7O75635 380 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 H6PDO95479 791 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 SPATA31D3P0C874 917 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 PCSK2P16519 638 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 BMP7P18075 431 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 IGFBP5P24593 272 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 PSMA1P25786 263 aaKnown RBP11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 IRS1P35568 1242 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 SEPHS1P49903 392 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 CCR3P51677 355 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 ACSBG2Q5FVE4 666 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 RNASEH2BQ5TBB1 312 aaKnown RBP11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 KIAA0319Q5VV43 1072 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 PTCRAQ6ISU1 281 aaPredicted RBP11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 ANKRD54Q6NXT1 300 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 SPATA31D4Q6ZUB0 917 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 SATL1Q86VE3 508 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 ARL10Q8N8L6 244 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 POMGNT2Q8NAT1 580 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 MTFMTQ96DP5 389 aaKnown RBP11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 KREMEN1Q96MU8 473 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 CCDC3Q9BQI4 270 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 MARCH2Q9P0N8 246 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 GPC6Q9Y625 555 aaPredicted RBP11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 WASF2Q9Y6W5 498 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 A0A088AWK7 358 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 FAM47E-STBD1D6RA91 191 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 SLC22A2O15244 555 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 TULP3O75386 442 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 OR6A2O95222 327 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 FADS2O95864 444 aaKnown RBP11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 FGF1P05230 155 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 ZNF10P21506 573 aaPredicted RBP11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 RALGDSQ12967 914 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 ADGRE1Q14246 886 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 PIH1D2Q8WWB5 315 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 CITED4Q96RK1 184 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 GPATCH1Q9BRR8 931 aaKnown RBP11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 EBF3Q9H4W6 596 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 RAD18Q9NS91 495 aa11.71□□□□□ -0.53
SYNGAP1-201ENST00000293748 A0A1W2PRG6 482 aa11.71□□□□□ -0.54
SYNGAP1-201ENST00000293748 POU3F3P20264 500 aaPredicted RBP11.71□□□□□ -0.54
SYNGAP1-201ENST00000293748 CTSKP43235 329 aa11.71□□□□□ -0.54
SYNGAP1-201ENST00000293748 SLC5A3P53794 718 aa11.71□□□□□ -0.54
SYNGAP1-201ENST00000293748 AQP4P55087 323 aa11.71□□□□□ -0.54
SYNGAP1-201ENST00000293748 GALNT3Q14435 633 aa11.71□□□□□ -0.54
SYNGAP1-201ENST00000293748 USP45Q70EL2 814 aa11.71□□□□□ -0.54
SYNGAP1-201ENST00000293748 STRADAQ7RTN6 431 aa11.71□□□□□ -0.54
SYNGAP1-201ENST00000293748 ROPN1LQ96C74 230 aa11.71□□□□□ -0.54
SYNGAP1-201ENST00000293748 TUBGCP5Q96RT8 1024 aa11.71□□□□□ -0.54
SYNGAP1-201ENST00000293748 PDCD10Q9BUL8 212 aa11.71□□□□□ -0.54
SYNGAP1-201ENST00000293748 FAIM2Q9BWQ8 316 aa11.71□□□□□ -0.54
SYNGAP1-201ENST00000293748 EBF2Q9HAK2 575 aa11.71□□□□□ -0.54
SYNGAP1-201ENST00000293748 SALL4Q9UJQ4 1053 aa11.71□□□□□ -0.54
SYNGAP1-201ENST00000293748 MFHAS1Q9Y4C4 1052 aa11.71□□□□□ -0.54
SYNGAP1-201ENST00000293748 SCN5AQ14524 2016 aa11.71□□□□□ -0.54
SYNGAP1-201ENST00000293748 PSMD11O00231 422 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 QSOX1O00391 747 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 CASKO14936 926 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 CCL16O15467 120 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 TCEA3O75764 348 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 PTGIRP43119 386 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 HSPA14Q0VDF9 509 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 DUSP4Q13115 394 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 ARL13AQ5H913 290 aaPredicted RBP11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 LYPLAL1Q5VWZ2 237 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 FAM220AQ7Z4H9 259 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 TRIM74Q86UV6 250 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 TRIM73Q86UV7 250 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 SLC34A3Q8N130 599 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 C2orf49Q9BVC5 232 aaPredicted RBP11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 THG1LQ9NWX6 298 aaKnown RBP11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 PFDN2Q9UHV9 154 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 PHF11Q9UIL8 331 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 FAM92AA1XBS5 289 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 HIDE1A8MVS5 230 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 H3BQ06 376 aaPredicted RBP11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 MTA2O94776 668 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 CYP4B1P13584 511 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 BDNFP23560 247 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 SLC6A2P23975 617 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 ECT2LQ008S8 904 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 DRICH1Q6PGQ1 229 aaPredicted RBP11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 AHI1Q8N157 1196 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 TEX47Q8TBZ9 253 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 SEMA3CQ99985 751 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 VRTNQ9H8Y1 702 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 PCDHGC3Q9UN70 934 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 POLR1DQ9Y2S0 133 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 YIPF1Q9Y548 306 aa11.7□□□□□ -0.54
SYNGAP1-201ENST00000293748 DGKBQ9Y6T7 804 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms