RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 DTNBP1Q96EV8 351 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 CCDC3Q9BQI4 270 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.72□□□□□ -1.65
UBR1-201ENST00000290650 TPK1Q9H3S4 243 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 NSUN3Q9H649 340 aaKnown RBP4.72□□□□□ -1.65
UBR1-201ENST00000290650 SLC22A14Q9Y267 594 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 GMPPBQ9Y5P6 360 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 TBC1D3DA0A087WVF3 549 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 TBC1D3IA0A087WXS9 549 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 TBC1D3EA0A087X179 549 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 TBC1D3KA0A087X1G2 549 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 GSAPA4D1B5 854 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 TBC1D3FA6NER0 549 aaPredicted RBP4.72□□□□□ -1.65
UBR1-201ENST00000290650 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.72□□□□□ -1.65
UBR1-201ENST00000290650 TBC1D3LB9A6J9 549 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 PPP6CO00743 305 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 RFPL2O75678 378 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 TRBC1P01850 177 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 FTH1P02794 183 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 TBC1D3HP0C7X1 549 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 HPCAL1P37235 193 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 BUD31P41223 144 aaPredicted RBP4.72□□□□□ -1.65
UBR1-201ENST00000290650 PREPP48147 710 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 NDST2P52849 883 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 PIGFQ07326 219 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 GALNT2Q10471 571 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 GANABQ14697 944 aaKnown RBP4.72□□□□□ -1.65
UBR1-201ENST00000290650 TBC1D3GQ6DHY5 549 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 TBC1D3CQ6IPX1 549 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 TMEM220Q6QAJ8 160 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 B3GNT6Q6ZMB0 384 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 MTSS1LQ765P7 747 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 ARHGAP22Q7Z5H3 698 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 GPR180Q86V85 440 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 TBC1D3Q8IZP1 549 aaPredicted RBP4.72□□□□□ -1.65
UBR1-201ENST00000290650 DENND1AQ8TEH3 1009 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 OSCP1Q8WVF1 389 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 RORBQ92753 470 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 GTPBP3Q969Y2 492 aaKnown RBP4.72□□□□□ -1.65
UBR1-201ENST00000290650 SH3GL1Q99961 368 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 TSEN34Q9BSV6 310 aaKnown RBP4.72□□□□□ -1.65
UBR1-201ENST00000290650 GIMAP4Q9NUV9 329 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 RAB23Q9ULC3 237 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 OAZ3Q9UMX2 235 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 TESMINQ9Y4I5 508 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.72□□□□□ -1.65
UBR1-201ENST00000290650 ISM1B1AKI9 464 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 LIN7AO14910 233 aaPredicted RBP4.72□□□□□ -1.65
UBR1-201ENST00000290650 RNASEH2AO75792 299 aaKnown RBP4.72□□□□□ -1.65
UBR1-201ENST00000290650 OR6B1O95007 311 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 FMO3P31513 532 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 SPAM1P38567 509 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 ARCN1P48444 511 aaKnown RBP4.72□□□□□ -1.65
UBR1-201ENST00000290650 MLLT6P55198 1093 aaPredicted RBP4.72□□□□□ -1.65
UBR1-201ENST00000290650 NIPAL4Q0D2K0 466 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 LCP2Q13094 533 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 CHIT1Q13231 466 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.72□□□□□ -1.65
UBR1-201ENST00000290650 GHDCQ8N2G8 530 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 PTCD3Q96EY7 689 aaKnown RBP4.72□□□□□ -1.65
UBR1-201ENST00000290650 MTG2Q9H4K7 406 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 ADAMTS6Q9UKP5 1117 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 CLEC4AQ9UMR7 237 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 RNF11Q9Y3C5 154 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 TNPO3Q9Y5L0 923 aaKnown RBP4.72□□□□□ -1.65
UBR1-201ENST00000290650 FADS3Q9Y5Q0 445 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 EI24O14681 340 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 XYLBO75191 536 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 SERPINA1P01009 418 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 BDKRB1P46663 353 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 ADARP55265 1226 aaKnown RBP4.72□□□□□ -1.65
UBR1-201ENST00000290650 HERVK_113P63132 956 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 CSTF3Q12996 717 aaKnown RBP4.72□□□□□ -1.65
UBR1-201ENST00000290650 DPYSQ14117 519 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 RNASE12Q5GAN4 147 aaKnown RBP4.72□□□□□ -1.65
UBR1-201ENST00000290650 UBXN11Q5T124 520 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 POMZP3Q6PJE2 187 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 EPGNQ6UW88 154 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 KRTCAP2Q8N6L1 136 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 AP2M1Q96CW1 435 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 DNAJA3Q96EY1 480 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 TCF12Q99081 682 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 ERVK-6Q9BXR3 956 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 TEX12Q9BXU0 123 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 SMOC2Q9H3U7 446 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 TLR9Q9NR96 1032 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 SORCS3Q9UPU3 1222 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 TRAFD1O14545 582 aaPredicted RBP4.72□□□□□ -1.65
UBR1-201ENST00000290650 STK16O75716 305 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 CATP04040 527 aaKnown RBP4.72□□□□□ -1.65
UBR1-201ENST00000290650 OCM2P0CE71 109 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 OCMP0CE72 109 aaPredicted RBP4.72□□□□□ -1.65
UBR1-201ENST00000290650 SLC35E2BP0CK96 405 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 PLA2G16P53816 162 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 CACNG1Q06432 222 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 LIN52Q52LA3 116 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 PATL1Q86TB9 770 aaKnown RBP4.72□□□□□ -1.65
UBR1-201ENST00000290650 UBE2J2Q8N2K1 259 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 GALNT15Q8N3T1 639 aa4.72□□□□□ -1.65
UBR1-201ENST00000290650 TMEM199Q8N511 208 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms