RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 ZNF358Q9NW07 568 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 ZDHHC3Q9NYG2 299 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 OGFRQ9NZT2 677 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 MOSPD1Q9UJG1 213 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 PRSS21Q9Y6M0 314 aa9□□□□□ -0.97
HMGN1-201ENST00000288344 KIR2DS5A0A0G2JLQ3 304 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 A0A0G2JNG1 304 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 HEATR9A2RTY3 570 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 PMS2P1A4D2B8 440 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 MGAT4DA6NG13 374 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 OR51F1A6NGY5 319 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 OR5K4A6NMS3 321 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 B4DGG1 531 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 D6RAR5 112 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 KIR2DS3K7RE56 304 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 CSO75390 466 aaKnown RBP8.99□□□□□ -0.97
HMGN1-201ENST00000288344 MLNP12872 115 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 ATP1B2P14415 290 aaPredicted RBP8.99□□□□□ -0.97
HMGN1-201ENST00000288344 NMBRP28336 390 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 CSF2RBP32927 897 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 LSSP48449 732 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 SERPINB4P48594 390 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 PRLHRP49683 370 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 OR1D5P58170 312 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 CRADDP78560 199 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 CACNG1Q06432 222 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 KIR2DS5Q14953 304 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 TRIP13Q15645 432 aaPredicted RBP8.99□□□□□ -0.97
HMGN1-201ENST00000288344 DBN1Q16643 649 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 SKIDA1Q1XH10 827 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 HS1BP3Q53T59 392 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 RNASEH2BQ5TBB1 312 aaKnown RBP8.99□□□□□ -0.97
HMGN1-201ENST00000288344 PACS1Q6VY07 963 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 SERPINA9Q86WD7 417 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 PROSER1Q86XN7 944 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 CCNJLQ8IV13 435 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 MPP5Q8N3R9 675 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 LILRA3Q8N6C8 439 aaPredicted RBP8.99□□□□□ -0.97
HMGN1-201ENST00000288344 BEND7Q8N7W2 519 aaPredicted RBP8.99□□□□□ -0.97
HMGN1-201ENST00000288344 ZNF514Q96K75 400 aaPredicted RBP8.99□□□□□ -0.97
HMGN1-201ENST00000288344 INSM2Q96T92 566 aaPredicted RBP8.99□□□□□ -0.97
HMGN1-201ENST00000288344 NAP1L3Q99457 506 aaPredicted RBP8.99□□□□□ -0.97
HMGN1-201ENST00000288344 DDX47Q9H0S4 455 aaKnown RBP8.99□□□□□ -0.97
HMGN1-201ENST00000288344 MRM3Q9HC36 420 aaKnown RBP8.99□□□□□ -0.97
HMGN1-201ENST00000288344 SLC40A1Q9NP59 571 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 ASCL3Q9NQ33 180 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 SEMA5BQ9P283 1151 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 CPNE7Q9UBL6 633 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 PCDHGA8Q9Y5G5 932 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 SAR1BQ9Y6B6 198 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 SLC30A1Q9Y6M5 507 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 PTPRQQ9UMZ3 2332 aa8.99□□□□□ -0.97
HMGN1-201ENST00000288344 ZFYVE26Q68DK2 2539 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 BSNQ9UPA5 3926 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 TRBV23OR9-2A0A075B6M9 112 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 ZCWPW2A0A1B0GU75 182 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 KLHL33A6NCF5 533 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 TMEM8BA6NDV4 472 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 OR2AG2A6NM03 316 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 CDRT15L2A8MXV6 281 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 GOT2P00505 430 aaKnown RBP8.98□□□□□ -0.97
HMGN1-201ENST00000288344 MSNP26038 577 aaKnown RBP8.98□□□□□ -0.97
HMGN1-201ENST00000288344 MGAT1P26572 445 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 ACADLP28330 430 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 TNNT3P45378 269 aaPredicted RBP8.98□□□□□ -0.97
HMGN1-201ENST00000288344 CYP4F3Q08477 520 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 GPS1Q13098 491 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 PTK6Q13882 451 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 NFE2L1Q14494 772 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 ITIH4Q14624 930 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 CCDC157Q569K6 752 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 CRTC3Q6UUV7 619 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 CAPN12Q6ZSI9 719 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 NLRP9Q7RTR0 991 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 ZNF572Q7Z3I7 529 aaPredicted RBP8.98□□□□□ -0.97
HMGN1-201ENST00000288344 ARHGAP22Q7Z5H3 698 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 AMZ2Q86W34 360 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 CLDN19Q8N6F1 224 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 GPR150Q8NGU9 434 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 MDM1Q8TC05 714 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 HEXDCQ8WVB3 486 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 ANP32BQ92688 251 aaKnown RBP8.98□□□□□ -0.97
HMGN1-201ENST00000288344 ULK4Q96C45 1275 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 MFSD3Q96ES6 412 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 ATXN7L3BQ96GX2 97 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 LIN37Q96GY3 246 aaPredicted RBP8.98□□□□□ -0.97
HMGN1-201ENST00000288344 SLC46A1Q96NT5 459 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 SERPINB12Q96P63 405 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 COPS8Q99627 209 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 NAPGQ99747 312 aaPredicted RBP8.98□□□□□ -0.97
HMGN1-201ENST00000288344 WDR83Q9BRX9 315 aaKnown RBP8.98□□□□□ -0.97
HMGN1-201ENST00000288344 TRIM56Q9BRZ2 755 aaKnown RBP8.98□□□□□ -0.97
HMGN1-201ENST00000288344 SPRY4Q9C004 299 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 IL22Q9GZX6 179 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 P2RY12Q9H244 342 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 OR52A5Q9H2C5 316 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 SEMA6CQ9H3T2 930 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 SYBUQ9NX95 663 aa8.98□□□□□ -0.97
HMGN1-201ENST00000288344 MARCH4Q9P2E8 410 aaPredicted RBP8.98□□□□□ -0.97
HMGN1-201ENST00000288344 RNF14Q9UBS8 474 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms