RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 CCDC6Q16204 474 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 PHKG1Q16816 387 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 SULT1C3Q6IMI6 304 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 GTF2H2CQ6P1K8 395 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 AAGABQ6PD74 315 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 PAOXQ6QHF9 649 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 LIPIQ6XZB0 460 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 GOLGA7Q7Z5G4 137 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 SPATA19Q7Z5L4 167 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 FUNDC1Q8IVP5 155 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.43□□□□□ -0.9
TRIM55-201ENST00000276573 RHBDF1Q96CC6 855 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 TUBGCP3Q96CW5 907 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 CCT7Q99832 543 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 TACO1Q9BSH4 297 aaKnown RBP9.43□□□□□ -0.9
TRIM55-201ENST00000276573 WDR41Q9HAD4 459 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 PFDN4Q9NQP4 134 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 SMOXQ9NWM0 555 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 OBP2AQ9NY56 170 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 GDE1Q9NZC3 331 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 NFKBIL1Q9UBC1 381 aaPredicted RBP9.43□□□□□ -0.9
TRIM55-201ENST00000276573 STOML1Q9UBI4 398 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 GIMAP2Q9UG22 337 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 POLG2Q9UHN1 485 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 SARDHQ9UL12 918 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 ST14Q9Y5Y6 855 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 PLXNB3Q9ULL4 1909 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 FBP2O00757 339 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 CFLARO15519 480 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 PRR35P0CG20 571 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 HGFP14210 728 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 ETV3P41162 512 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 MAGEA10P43363 369 aaPredicted RBP9.43□□□□□ -0.9
TRIM55-201ENST00000276573 HSPA7P48741 367 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 STX1BP61266 288 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 IRX1P78414 480 aaPredicted RBP9.43□□□□□ -0.9
TRIM55-201ENST00000276573 CCNIQ14094 377 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 LRP8Q14114 963 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 GBX1Q14549 363 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 PDGFRLQ15198 375 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 GSTA3Q16772 222 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 ZNF423Q2M1K9 1284 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 POM121L1PQ3SYA9 428 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 PIGGQ5H8A4 983 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 CDKL4Q5MAI5 379 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 C9orf64Q5T6V5 341 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 OGFOD2Q6N063 350 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 SCIMPQ6UWF3 145 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 BNC2Q6ZN30 1099 aaPredicted RBP9.43□□□□□ -0.9
TRIM55-201ENST00000276573 GPR149Q86SP6 731 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 TRAM1L1Q8N609 369 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 CDYL2Q8N8U2 506 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 ST13P5Q8NFI4 369 aaPredicted RBP9.43□□□□□ -0.9
TRIM55-201ENST00000276573 OR52B6Q8NGF0 335 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 TIFAQ96CG3 184 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 DCUN1D1Q96GG9 259 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 ACOX2Q99424 681 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 CDCA3Q99618 268 aaPredicted RBP9.43□□□□□ -0.9
TRIM55-201ENST00000276573 EGFL8Q99944 293 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 SLC25A23Q9BV35 468 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 RIOK2Q9BVS4 552 aaKnown RBP9.43□□□□□ -0.9
TRIM55-201ENST00000276573 APOL5Q9BWW9 433 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 CD244Q9BZW8 370 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 NKX2-4Q9H2Z4 354 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 NSUN3Q9H649 340 aaKnown RBP9.43□□□□□ -0.9
TRIM55-201ENST00000276573 IGFLR1Q9H665 355 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 IPPKQ9H8X2 491 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 DZANK1Q9NVP4 752 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 THG1LQ9NWX6 298 aaKnown RBP9.43□□□□□ -0.9
TRIM55-201ENST00000276573 SUN2Q9UH99 717 aa9.43□□□□□ -0.9
TRIM55-201ENST00000276573 CFAP99D6REC4 459 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 KPNA5O15131 536 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 NRP2O60462 931 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 PRNPP04156 253 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 MPC1LP0DKB6 136 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 ANPEPP15144 967 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 FCARP24071 287 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 AKT1P31749 480 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 MMP12P39900 470 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 DPP6P42658 865 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 ERFP50548 548 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 PSME3P61289 254 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 AP2B1P63010 937 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 KIF19Q2TAC6 998 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 MMEL1Q495T6 779 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 FNDC3BQ53EP0 1204 aaKnown RBP9.42□□□□□ -0.9
TRIM55-201ENST00000276573 XKR7Q5GH72 579 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 TCHHL1Q5QJ38 904 aaPredicted RBP9.42□□□□□ -0.9
TRIM55-201ENST00000276573 PLEKHS1Q5SXH7 462 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 HENMT1Q5T8I9 393 aaKnown RBP9.42□□□□□ -0.9
TRIM55-201ENST00000276573 REP15Q6BDI9 236 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 TANGO2Q6ICL3 276 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 LETMD1Q6P1Q0 360 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 METTL2BQ6P1Q9 378 aaKnown RBP9.42□□□□□ -0.9
TRIM55-201ENST00000276573 PARS2Q7L3T8 475 aaKnown RBP9.42□□□□□ -0.9
TRIM55-201ENST00000276573 GET4Q7L5D6 327 aaPredicted RBP9.42□□□□□ -0.9
TRIM55-201ENST00000276573 DET1Q7L5Y6 550 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 MIER2Q8N344 545 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 SNX31Q8N9S9 440 aa9.42□□□□□ -0.9
TRIM55-201ENST00000276573 TMIEQ8NEW7 156 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms