RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 OSMRQ99650 979 aa12.68□□□□□ -0.38
HERC6-202ENST00000273960 ADGRE2Q9UHX3 823 aa12.68□□□□□ -0.38
HERC6-202ENST00000273960 WBP11Q9Y2W2 641 aaKnown RBP12.68□□□□□ -0.38
HERC6-202ENST00000273960 NME7Q9Y5B8 376 aa12.68□□□□□ -0.38
HERC6-202ENST00000273960 ORC6Q9Y5N6 252 aa12.68□□□□□ -0.38
HERC6-202ENST00000273960 H0YAE9 185 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 AIREO43918 545 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 MYCP01106 439 aaPredicted RBP12.67□□□□□ -0.38
HERC6-202ENST00000273960 MAXP61244 160 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 CDK5R2Q13319 367 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 ZNF404Q494X3 552 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 PARP16Q8N5Y8 322 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 SLC35F5Q8WV83 523 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 YTHDF1Q9BYJ9 559 aaKnown RBP12.67□□□□□ -0.38
HERC6-202ENST00000273960 SLIRPQ9GZT3 109 aaKnown RBP12.67□□□□□ -0.38
HERC6-202ENST00000273960 RANGRFQ9HD47 186 aaPredicted RBP12.67□□□□□ -0.38
HERC6-202ENST00000273960 EIF2B3Q9NR50 452 aaKnown RBP12.67□□□□□ -0.38
HERC6-202ENST00000273960 NUFIP1Q9UHK0 495 aaKnown RBP12.67□□□□□ -0.38
HERC6-202ENST00000273960 COMMD10Q9Y6G5 202 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 SMIM30A4D0T7 59 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 ERVH48-1M5A8F1 160 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 HBP1O60381 514 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 B4GALT4O60513 344 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 LGALS2P05162 132 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 AKAP5P24588 427 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 NOS2P35228 1153 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 NPY2RP49146 381 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 P2RX3P56373 397 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 UGP2Q16851 508 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 SLC10A6Q3KNW5 377 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 EFL1Q7Z2Z2 1120 aaKnown RBP12.67□□□□□ -0.38
HERC6-202ENST00000273960 SVOPQ8N4V2 548 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 MINDY1Q8N5J2 469 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 AURKBQ96GD4 344 aaPredicted RBP12.67□□□□□ -0.38
HERC6-202ENST00000273960 CPNE5Q9HCH3 593 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 EXOSC4Q9NPD3 245 aaKnown RBP12.67□□□□□ -0.38
HERC6-202ENST00000273960 ADAMTS5Q9UNA0 930 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 FAM50BQ9Y247 325 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 BTBD3Q9Y2F9 522 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 PCDHB14Q9Y5E9 798 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 ASPDHA6ND91 283 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 A8MUA0 341 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 UPK1AO00322 258 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 PRSS23O95084 383 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 TGFB3P10600 412 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 GADD45AP24522 165 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 CDKN2DP55273 166 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 RBBP7Q16576 425 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 ZNF648Q5T619 568 aaPredicted RBP12.67□□□□□ -0.38
HERC6-202ENST00000273960 LAIR1Q6GTX8 287 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 DENND5AQ6IQ26 1287 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 PKN3Q6P5Z2 889 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 Q6ZPB1 254 aaPredicted RBP12.67□□□□□ -0.38
HERC6-202ENST00000273960 FAM126BQ8IXS8 530 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 GLB1L3Q8NCI6 653 aaPredicted RBP12.67□□□□□ -0.38
HERC6-202ENST00000273960 PPHLN1Q8NEY8 458 aaKnown RBP12.67□□□□□ -0.38
HERC6-202ENST00000273960 TRIB2Q92519 343 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 TP53INP1Q96A56 240 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 PTERQ96BW5 349 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 TMEM134Q9H6X4 195 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 ACTR8Q9H981 624 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 TMLHEQ9NVH6 421 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 OPTCQ9UBM4 332 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 KCTD3Q9Y597 815 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 PCDHGA10Q9Y5H3 936 aa12.67□□□□□ -0.38
HERC6-202ENST00000273960 A0A096LPI6 279 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 UBA6A0AVT1 1052 aaPredicted RBP12.66□□□□□ -0.38
HERC6-202ENST00000273960 FAM172BPA6NC97 362 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 CTDSP2O14595 271 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 CXCL11O14625 94 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 KATNA1O75449 491 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 GABARAPO95166 117 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 ZNF682O95780 498 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 CHRM5P08912 532 aaPredicted RBP12.66□□□□□ -0.38
HERC6-202ENST00000273960 C21orf33P30042 268 aaPredicted RBP12.66□□□□□ -0.38
HERC6-202ENST00000273960 Q5BKY6 102 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 SGO1Q5FBB7 561 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 VARS2Q5ST30 1063 aaKnown RBP12.66□□□□□ -0.38
HERC6-202ENST00000273960 PRMT9Q6P2P2 845 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 SYCE2Q6PIF2 218 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 GCNT7Q6ZNI0 430 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 FAM217AQ8IXS0 508 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 CDYL2Q8N8U2 506 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 CLHC1Q8NHS4 586 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.66□□□□□ -0.38
HERC6-202ENST00000273960 MED10Q9BTT4 135 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 DDIT4Q9NX09 232 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 KLHL20Q9Y2M5 609 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 GREB1LQ9C091 1923 aaPredicted RBP12.66□□□□□ -0.38
HERC6-202ENST00000273960 A0A0G2JLL6 359 aaPredicted RBP12.66□□□□□ -0.38
HERC6-202ENST00000273960 SMLR1H3BR10 107 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 MYL3P08590 195 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 CTSHP09668 335 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 PCMT1P22061 227 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 GLUD2P49448 558 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 AGTR2P50052 363 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 KPNA2P52292 529 aaKnown RBP12.66□□□□□ -0.38
HERC6-202ENST00000273960 DGKEP52429 567 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 SLAMF1Q13291 335 aa12.66□□□□□ -0.38
HERC6-202ENST00000273960 ZNF678Q5SXM1 525 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms