RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 ANKS6Q68DC2 871 aa16.09■□□□□ 0.17
TPM1-201ENST00000267996 NEK10Q6ZWH5 1172 aa16.09■□□□□ 0.17
TPM1-201ENST00000267996 RASGRP3Q8IV61 690 aa16.09■□□□□ 0.17
TPM1-201ENST00000267996 AGR3Q8TD06 166 aa16.09■□□□□ 0.17
TPM1-201ENST00000267996 ZNF483Q8TF39 744 aaPredicted RBP16.09■□□□□ 0.17
TPM1-201ENST00000267996 DLG3Q92796 817 aa16.09■□□□□ 0.17
TPM1-201ENST00000267996 PRR11Q96HE9 360 aaPredicted RBP16.09■□□□□ 0.17
TPM1-201ENST00000267996 RILPQ96NA2 401 aa16.09■□□□□ 0.17
TPM1-201ENST00000267996 CD274Q9NZQ7 290 aa16.09■□□□□ 0.17
TPM1-201ENST00000267996 ADAMTS6Q9UKP5 1117 aa16.09■□□□□ 0.17
TPM1-201ENST00000267996 SORCS3Q9UPU3 1222 aa16.09■□□□□ 0.17
TPM1-201ENST00000267996 CDYLQ9Y232 598 aa16.09■□□□□ 0.17
TPM1-201ENST00000267996 ANKRD12Q6UB98 2062 aa16.08■□□□□ 0.17
TPM1-201ENST00000267996 A0A1W2PP55 124 aa16.08■□□□□ 0.17
TPM1-201ENST00000267996 RAD51BO15315 384 aa16.08■□□□□ 0.17
TPM1-201ENST00000267996 FFAR2O15552 330 aa16.08■□□□□ 0.17
TPM1-201ENST00000267996 SNX2O60749 519 aa16.08■□□□□ 0.17
TPM1-201ENST00000267996 DIAPH2O60879 1101 aa16.08■□□□□ 0.17
TPM1-201ENST00000267996 CDK14O94921 469 aa16.08■□□□□ 0.17
TPM1-201ENST00000267996 ASGR2P07307 311 aa16.08■□□□□ 0.17
TPM1-201ENST00000267996 FGF4P08620 206 aa16.08■□□□□ 0.17
TPM1-201ENST00000267996 HOXB2P14652 356 aa16.08■□□□□ 0.17
TPM1-201ENST00000267996 COL9A1P20849 921 aa16.08■□□□□ 0.17
TPM1-201ENST00000267996 GPR1P46091 355 aa16.08■□□□□ 0.17
TPM1-201ENST00000267996 CTSCP53634 463 aa16.08■□□□□ 0.17
TPM1-201ENST00000267996 CDH13P55290 713 aa16.08■□□□□ 0.17
TPM1-201ENST00000267996 NCALDP61601 193 aa16.08■□□□□ 0.17
TPM1-201ENST00000267996 PCBP2Q15366 365 aaKnown RBP eCLIP16.08■□□□□ 0.172e-12■■■■□ 19.4
TPM1-201ENST00000267996 BCL7AQ4VC05 210 aa16.08■□□□□ 0.17
TPM1-201ENST00000267996 SLC9B1Q4ZJI4 515 aa16.08■□□□□ 0.17
TPM1-201ENST00000267996 METTL21CQ5VZV1 264 aa16.08■□□□□ 0.17
TPM1-201ENST00000267996 ADAMTSL4Q6UY14 1074 aa16.08■□□□□ 0.17
TPM1-201ENST00000267996 PTBP2Q9UKA9 531 aaKnown RBP16.08■□□□□ 0.17
TPM1-201ENST00000267996 PCTPQ9UKL6 214 aa16.08■□□□□ 0.17
TPM1-201ENST00000267996 TRPM6Q9BX84 2022 aa16.08■□□□□ 0.16
TPM1-201ENST00000267996 IGLON5A6NGN9 336 aa16.08■□□□□ 0.16
TPM1-201ENST00000267996 CAPN14A8MX76 684 aa16.08■□□□□ 0.16
TPM1-201ENST00000267996 TMEM233B4DJY2 109 aa16.08■□□□□ 0.16
TPM1-201ENST00000267996 INPP4BO15327 924 aa16.08■□□□□ 0.16
TPM1-201ENST00000267996 ATP5HO75947 161 aa16.08■□□□□ 0.16
TPM1-201ENST00000267996 TM7SF2O76062 418 aa16.08■□□□□ 0.16
TPM1-201ENST00000267996 SLCO2B1O94956 709 aa16.08■□□□□ 0.16
TPM1-201ENST00000267996 FSBPO95073 299 aa16.08■□□□□ 0.16
TPM1-201ENST00000267996 UNC5CO95185 931 aa16.08■□□□□ 0.16
TPM1-201ENST00000267996 AGTR2P50052 363 aa16.08■□□□□ 0.16
TPM1-201ENST00000267996 SH3BP2P78314 561 aa16.08■□□□□ 0.16
TPM1-201ENST00000267996 CLCQ05315 142 aa16.08■□□□□ 0.16
TPM1-201ENST00000267996 ZNF658BQ4V348 819 aaPredicted RBP16.08■□□□□ 0.16
TPM1-201ENST00000267996 CDKL4Q5MAI5 379 aa16.08■□□□□ 0.16
TPM1-201ENST00000267996 RAET1GQ6H3X3 334 aa16.08■□□□□ 0.16
TPM1-201ENST00000267996 FRA10AC1Q70Z53 315 aa16.08■□□□□ 0.16
TPM1-201ENST00000267996 TMPRSS6Q8IU80 811 aa16.08■□□□□ 0.16
TPM1-201ENST00000267996 COX14Q96I36 57 aa16.08■□□□□ 0.16
TPM1-201ENST00000267996 MAELQ96JY0 434 aaKnown RBP16.08■□□□□ 0.16
TPM1-201ENST00000267996 NSUN5Q96P11 429 aaKnown RBP16.08■□□□□ 0.16
TPM1-201ENST00000267996 CCDC28BQ9BUN5 200 aa16.08■□□□□ 0.16
TPM1-201ENST00000267996 ZCCHC2Q9C0B9 1178 aaKnown RBP16.08■□□□□ 0.16
TPM1-201ENST00000267996 TRIM39Q9HCM9 518 aa16.08■□□□□ 0.16
TPM1-201ENST00000267996 SLC2A4RGQ9NR83 387 aa16.08■□□□□ 0.16
TPM1-201ENST00000267996 TSR3Q9UJK0 312 aaKnown RBP16.08■□□□□ 0.16
TPM1-201ENST00000267996 TRAF6Q9Y4K3 522 aa16.08■□□□□ 0.16
TPM1-201ENST00000267996 NCF1BA6NI72 391 aaPredicted RBP16.07■□□□□ 0.16
TPM1-201ENST00000267996 OR2AG2A6NM03 316 aa16.07■□□□□ 0.16
TPM1-201ENST00000267996 NCF1CA8MVU1 366 aaPredicted RBP16.07■□□□□ 0.16
TPM1-201ENST00000267996 NARSO43776 548 aaKnown RBP16.07■□□□□ 0.16
TPM1-201ENST00000267996 LILRB5O75023 590 aa16.07■□□□□ 0.16
TPM1-201ENST00000267996 ATG13O75143 517 aa16.07■□□□□ 0.16
TPM1-201ENST00000267996 RNASEH2AO75792 299 aaKnown RBP16.07■□□□□ 0.16
TPM1-201ENST00000267996 DNAJC8O75937 253 aaPredicted RBP16.07■□□□□ 0.16
TPM1-201ENST00000267996 JUNP05412 331 aaKnown RBP16.07■□□□□ 0.16
TPM1-201ENST00000267996 NCF1P14598 390 aaPredicted RBP16.07■□□□□ 0.16
TPM1-201ENST00000267996 TEAD1P28347 426 aa16.07■□□□□ 0.16
TPM1-201ENST00000267996 INHBCP55103 352 aa16.07■□□□□ 0.16
TPM1-201ENST00000267996 HSPA14Q0VDF9 509 aa16.07■□□□□ 0.16
TPM1-201ENST00000267996 LCP2Q13094 533 aa16.07■□□□□ 0.16
TPM1-201ENST00000267996 PHKG1Q16816 387 aa16.07■□□□□ 0.16
TPM1-201ENST00000267996 FBXO43Q4G163 708 aa16.07■□□□□ 0.16
TPM1-201ENST00000267996 ADGRG6Q86SQ4 1221 aa16.07■□□□□ 0.16
TPM1-201ENST00000267996 CACUL1Q86Y37 369 aa16.07■□□□□ 0.16
TPM1-201ENST00000267996 VRK3Q8IV63 474 aa16.07■□□□□ 0.16
TPM1-201ENST00000267996 AFAP1L2Q8N4X5 818 aa16.07■□□□□ 0.16
TPM1-201ENST00000267996 BEND7Q8N7W2 519 aaPredicted RBP16.07■□□□□ 0.16
TPM1-201ENST00000267996 ASZ1Q8WWH4 475 aa16.07■□□□□ 0.16
TPM1-201ENST00000267996 ASB11Q8WXH4 323 aa16.07■□□□□ 0.16
TPM1-201ENST00000267996 ELMO1Q92556 727 aa16.07■□□□□ 0.16
TPM1-201ENST00000267996 OR52B2Q96RD2 323 aa16.07■□□□□ 0.16
TPM1-201ENST00000267996 CCM2Q9BSQ5 444 aa16.07■□□□□ 0.16
TPM1-201ENST00000267996 TUBB6Q9BUF5 446 aa16.07■□□□□ 0.16
TPM1-201ENST00000267996 NUF2Q9BZD4 464 aa16.07■□□□□ 0.16
TPM1-201ENST00000267996 ZBTB26Q9HCK0 441 aa16.07■□□□□ 0.16
TPM1-201ENST00000267996 TXLNGQ9NUQ3 528 aa16.07■□□□□ 0.16
TPM1-201ENST00000267996 FBXL12Q9NXK8 326 aa16.07■□□□□ 0.16
TPM1-201ENST00000267996 UTP6Q9NYH9 597 aaKnown RBP16.07■□□□□ 0.16
TPM1-201ENST00000267996 SCML1Q9UN30 329 aa16.07■□□□□ 0.16
TPM1-201ENST00000267996 TNPO3Q9Y5L0 923 aaKnown RBP16.07■□□□□ 0.16
TPM1-201ENST00000267996 EYSQ5T1H1 3165 aa16.06■□□□□ 0.16
TPM1-201ENST00000267996 TRPC5OSA6NMA1 111 aa16.06■□□□□ 0.16
TPM1-201ENST00000267996 GFYI3L273 518 aa16.06■□□□□ 0.16
TPM1-201ENST00000267996 E2F3O00716 465 aa16.06■□□□□ 0.16
TPM1-201ENST00000267996 PPP6CO00743 305 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms