RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 MRPL17Q9NRX2 175 aaKnown RBP11.97□□□□□ -0.49
SRRM4-201ENST00000267260 MROH2AA6NES4 1674 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 ERAL1O75616 437 aaKnown RBP11.97□□□□□ -0.49
SRRM4-201ENST00000267260 CCR10P46092 362 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 PGM5Q15124 567 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 SF1Q15637 639 aaKnown RBP11.97□□□□□ -0.49
SRRM4-201ENST00000267260 METTL21AQ8WXB1 218 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 C5orf34Q96MH7 638 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 NELFAQ9H3P2 528 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 TMEM134Q9H6X4 195 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 TAS2R3Q9NYW6 316 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 NDUFAF4Q9P032 175 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 ISM1B1AKI9 464 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 SLC25A14O95258 325 aaPredicted RBP11.97□□□□□ -0.49
SRRM4-201ENST00000267260 MATKP42679 507 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 GRK6P43250 576 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 GNPDA1P46926 289 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 PUS10Q3MIT2 529 aaKnown RBP11.97□□□□□ -0.49
SRRM4-201ENST00000267260 CRTC2Q53ET0 693 aaPredicted RBP11.97□□□□□ -0.49
SRRM4-201ENST00000267260 TMPRSS11BQ86T26 416 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 REPS2Q8NFH8 660 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 FTHL17Q9BXU8 183 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 ACSS3Q9H6R3 686 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 BTRCQ9Y297 605 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 IL1BP01584 269 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 S100A10P60903 97 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 SMARCB1Q12824 385 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 GTF2IRD2BQ6EKJ0 949 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 GTF2IRD2Q86UP8 949 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 OR14K1Q8NGZ2 314 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 SLC38A4Q969I6 547 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 FARSBQ9NSD9 589 aaKnown RBP11.97□□□□□ -0.49
SRRM4-201ENST00000267260 PLLPQ9Y342 182 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 A8MX80 341 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 RENP00797 406 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 SHBGP04278 402 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 ACVR2AP27037 513 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 GBX2P52951 348 aaPredicted RBP11.97□□□□□ -0.49
SRRM4-201ENST00000267260 CPSF6Q16630 551 aaKnown RBP eCLIP11.97□□□□□ -0.49
SRRM4-201ENST00000267260 C12orf50Q8NA57 414 aaPredicted RBP11.97□□□□□ -0.49
SRRM4-201ENST00000267260 KCTD15Q96SI1 283 aaPredicted RBP11.97□□□□□ -0.49
SRRM4-201ENST00000267260 ZNF649Q9BS31 505 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 DHX33Q9H6R0 707 aaKnown RBP11.97□□□□□ -0.49
SRRM4-201ENST00000267260 LYARQ9NX58 379 aaKnown RBP11.97□□□□□ -0.49
SRRM4-201ENST00000267260 HIF3AQ9Y2N7 669 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 MAGI3Q5TCQ9 1506 aa11.97□□□□□ -0.49
SRRM4-201ENST00000267260 ZNF99A8MXY4 864 aaPredicted RBP11.96□□□□□ -0.49
SRRM4-201ENST00000267260 MAP2K7O14733 419 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 NME6O75414 186 aaPredicted RBP11.96□□□□□ -0.49
SRRM4-201ENST00000267260 TBX2Q13207 712 aaPredicted RBP11.96□□□□□ -0.49
SRRM4-201ENST00000267260 BTG3Q14201 252 aaPredicted RBP11.96□□□□□ -0.49
SRRM4-201ENST00000267260 CPNE9Q8IYJ1 553 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 UBE2J2Q8N2K1 259 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 ZNF527Q8NB42 609 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 TRPM4Q8TD43 1214 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 TCEAL4Q96EI5 215 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 PGLYRP2Q96PD5 576 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 CD320Q9NPF0 282 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 KCTD5Q9NXV2 234 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 RGS6P49758 472 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 ANTXR2P58335 489 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 VLDLRP98155 873 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 KLHL26Q53HC5 615 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 XKR4Q5GH76 650 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 GLYATQ6IB77 296 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 DUS1LQ6P1R4 473 aaKnown RBP11.96□□□□□ -0.49
SRRM4-201ENST00000267260 SERPINA13PQ6UXR4 307 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 OTUB2Q96DC9 234 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 KCTD7Q96MP8 289 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 RNF157Q96PX1 679 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 HCN3Q9P1Z3 774 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 ASF1AQ9Y294 204 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 TMX2Q9Y320 296 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 PRAMEF12O95522 483 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 MC1RQ01726 317 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 AUHQ13825 339 aaKnown RBP11.96□□□□□ -0.49
SRRM4-201ENST00000267260 GALNT12Q8IXK2 581 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 BPIFB1Q8TDL5 484 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 KERAO60938 352 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 ASLP04424 464 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 ARP10275 920 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 RPA4Q13156 261 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 RNASEH2BQ5TBB1 312 aaKnown RBP11.96□□□□□ -0.49
SRRM4-201ENST00000267260 UBE2R2Q712K3 238 aaPredicted RBP11.96□□□□□ -0.49
SRRM4-201ENST00000267260 TOMM5Q8N4H5 51 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 DNAJB3Q8WWF6 145 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 KAT2AQ92830 837 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 EXOC2Q96KP1 924 aa11.96□□□□□ -0.49
SRRM4-201ENST00000267260 CNDP2Q96KP4 475 aaKnown RBP11.96□□□□□ -0.49
SRRM4-201ENST00000267260 RANBP3Q9H6Z4 567 aaPredicted RBP11.96□□□□□ -0.49
SRRM4-201ENST00000267260 BHMG1C9JSJ3 638 aaPredicted RBP11.96□□□□□ -0.5
SRRM4-201ENST00000267260 ZBTB7AO95365 584 aa11.96□□□□□ -0.5
SRRM4-201ENST00000267260 H6PDO95479 791 aa11.96□□□□□ -0.5
SRRM4-201ENST00000267260 HTR2AP28223 471 aa11.96□□□□□ -0.5
SRRM4-201ENST00000267260 HTR7P34969 479 aa11.96□□□□□ -0.5
SRRM4-201ENST00000267260 NUMBP49757 651 aa11.96□□□□□ -0.5
SRRM4-201ENST00000267260 GPR135Q8IZ08 494 aa11.96□□□□□ -0.5
SRRM4-201ENST00000267260 OR10H4Q8NGA5 316 aa11.96□□□□□ -0.5
SRRM4-201ENST00000267260 TMEM68Q96MH6 324 aa11.96□□□□□ -0.5
SRRM4-201ENST00000267260 ZNF570Q96NI8 536 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms