RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 MS4A4AQ96JQ5 239 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 GPR20Q99678 358 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 POMKQ9H5K3 350 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 WASH6PQ9NQA3 447 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 IARS2Q9NSE4 1012 aaKnown RBP8.67□□□□□ -1.02
VAPB-201ENST00000265619 SLC23A1Q9UHI7 598 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 MAFFQ9ULX9 164 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 VPS4AQ9UN37 437 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 PCDHA9Q9Y5H5 950 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 ADGRA2Q96PE1 1338 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 ZCWPW2A0A1B0GU75 182 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 MEIOCA2RUB1 952 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 OR6C70A6NIJ9 312 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 SAGE2PA6NJ88 616 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 CAPN5O15484 640 aaPredicted RBP8.67□□□□□ -1.02
VAPB-201ENST00000265619 CD36P16671 472 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 DSTNP60981 165 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 CELF3Q5SZQ8 465 aaKnown RBP8.67□□□□□ -1.02
VAPB-201ENST00000265619 FAM102AQ5T9C2 384 aaPredicted RBP8.67□□□□□ -1.02
VAPB-201ENST00000265619 LAMTOR1Q6IAA8 161 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 ZNF517Q6ZMY9 492 aaPredicted RBP8.67□□□□□ -1.02
VAPB-201ENST00000265619 PLEKHH3Q7Z736 793 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 B3GNT8Q7Z7M8 397 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 COLGALT1Q8NBJ5 622 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 BPIFB1Q8TDL5 484 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 DEDD2Q8WXF8 326 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 TMEM125Q96AQ2 219 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 OR2A14Q96R47 310 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 TWNKQ96RR1 684 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 ARHGAP39Q9C0H5 1083 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 TEKT2Q9UIF3 430 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 CPSF3Q9UKF6 684 aaKnown RBP8.67□□□□□ -1.02
VAPB-201ENST00000265619 VANGL2Q9ULK5 521 aa8.67□□□□□ -1.02
VAPB-201ENST00000265619 A0A087WZ62 844 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 NOS1APO75052 506 aaPredicted RBP8.66□□□□□ -1.02
VAPB-201ENST00000265619 IL7P13232 177 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 CYP4B1P13584 511 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 HSD17B1P14061 328 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 TPH1P17752 444 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 CRISP3P54108 245 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 MVKQ03426 396 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 LIPEQ05469 1076 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 SMARCB1Q12824 385 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 CDK5R2Q13319 367 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 TP53BP2Q13625 1128 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 CYP27C1Q4G0S4 372 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 PAGE3Q5JUK9 113 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 DENND5AQ6IQ26 1287 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 TAF2Q6P1X5 1199 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 XRRA1Q6P2D8 792 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 PNCKQ6P2M8 343 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 EFL1Q7Z2Z2 1120 aaKnown RBP8.66□□□□□ -1.02
VAPB-201ENST00000265619 KIAA1958Q8N8K9 716 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 TTLQ8NG68 377 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 STON2Q8WXE9 905 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 RIPOR3Q96MK2 946 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 Q96MT0 163 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 FDXACB1Q9BRP7 624 aaPredicted RBP8.66□□□□□ -1.02
VAPB-201ENST00000265619 KIFC1Q9BW19 673 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 MEAF6Q9HAF1 191 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 DTLQ9NZJ0 730 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 GABRQQ9UN88 632 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 IPPQ9Y573 584 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 DNMT3AQ9Y6K1 912 aaPredicted RBP8.66□□□□□ -1.02
VAPB-201ENST00000265619 ASB14A6NK59 587 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 FADS2P1A8MWK0 482 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 CABYRO75952 493 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 PRKCBP05771 671 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 CTSHP09668 335 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 BMP1P13497 986 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 DDCP20711 480 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 CLCN7P51798 805 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 NKX3-2P78367 333 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 HOXC5Q00444 222 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 LAMTOR4Q0VGL1 99 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 GALNT3Q14435 633 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 CERCAMQ5T4B2 595 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 ALKBH2Q6NS38 261 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 LINC00299Q6ZSB3 139 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 PRSS48Q7RTY5 328 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 GLCCI1Q86VQ1 547 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 ZBTB8OSQ8IWT0 167 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 CLYBLQ8N0X4 340 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 UBA3Q8TBC4 463 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 SLC7A6Q92536 515 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 LRRC58Q96CX6 371 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 TMEM80Q96HE8 168 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 MYOCQ99972 504 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 SNRNP25Q9BV90 132 aaKnown RBP8.66□□□□□ -1.02
VAPB-201ENST00000265619 GLTPQ9NZD2 209 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 SEPT10Q9P0V9 454 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 EIF3KQ9UBQ5 218 aaKnown RBP8.66□□□□□ -1.02
VAPB-201ENST00000265619 LOXHD1Q8IVV2 1947 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 AREL1O15033 823 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 LSM8O95777 96 aaKnown RBP8.66□□□□□ -1.02
VAPB-201ENST00000265619 LGALS2P05162 132 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 YES1P07947 543 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 MSH3P20585 1137 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 GADD45AP24522 165 aa8.66□□□□□ -1.02
VAPB-201ENST00000265619 CDH5P33151 784 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms