RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 ABLIM1O14639 778 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 OR4F21O95013 312 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 GNALP38405 381 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 CDKN2BP42772 138 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 SLC5A3P53794 718 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 VBP1P61758 197 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 CACNG1Q06432 222 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 TAF10Q12962 218 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 BSNDQ8WZ55 320 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 COQ10BQ9H8M1 238 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 FBXW2Q9UKT8 454 aa17.8■□□□□ 0.44
COL5A3-201ENST00000264828 MID1O15344 667 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 PSMD8P48556 350 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 SNX20Q7Z614 316 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 MON1AQ86VX9 555 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 PHYKPLQ8IUZ5 450 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 OR8H3Q8N146 312 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 CENPNQ96H22 339 aaPredicted RBP17.79■□□□□ 0.44
COL5A3-201ENST00000264828 LMLNQ96KR4 655 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 CADM1Q9BY67 442 aaKnown RBP17.79■□□□□ 0.44
COL5A3-201ENST00000264828 NUDT4Q9NZJ9 180 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 TRPS1Q9UHF7 1281 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 DNM1LO00429 736 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 GRM6O15303 877 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 SCN1BQ07699 218 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 SLC20A2Q08357 652 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 PDPRQ8NCN5 879 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 HSD17B14Q9BPX1 270 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 FAM105AQ9NUU6 356 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 SAGE2PA6NJ88 616 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 STK16O75716 305 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 COL6A2P12110 1019 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 CD247P20963 164 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 ADRA1BP35368 520 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 RABGGTBP53611 331 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 INHBEP58166 350 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 UBAP2Q5T6F2 1119 aaKnown RBP17.79■□□□□ 0.44
COL5A3-201ENST00000264828 IDNKQ5T6J7 187 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 EIF2B4Q9UI10 523 aaKnown RBP17.79■□□□□ 0.44
COL5A3-201ENST00000264828 PDE10AQ9Y233 779 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 ENPP3O14638 875 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 GOT2P00505 430 aaKnown RBP17.79■□□□□ 0.44
COL5A3-201ENST00000264828 LAMP2P13473 410 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 KCNA5P22460 613 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 SPAM1P38567 509 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 PBX1P40424 430 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 MAZP56270 477 aaKnown RBP17.79■□□□□ 0.44
COL5A3-201ENST00000264828 CREMQ03060 361 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 USP30Q70CQ3 517 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 LRRC52Q8N7C0 313 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 CNTD1Q8N815 330 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 UNC93B1Q9H1C4 597 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 MUC13Q9H3R2 512 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 MRC1P22897 1456 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 SCAMP1O15126 338 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 DNTTP04053 509 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 FMO3P31513 532 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 CASP9P55211 416 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 SMARCB1Q12824 385 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 FAM110BQ8TC76 370 aa17.79■□□□□ 0.44
COL5A3-201ENST00000264828 WRAP53Q9BUR4 548 aaKnown RBP17.79■□□□□ 0.44
COL5A3-201ENST00000264828 WRBO00258 174 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 C1RP00736 705 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 MMP8P22894 467 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 OR1D2P34982 312 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 WASP42768 502 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 SP3Q02447 781 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 LINGO2Q7L985 606 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 TMEM199Q8N511 208 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 MYCLP1P12525 358 aaPredicted RBP17.78■□□□□ 0.44
COL5A3-201ENST00000264828 ASMTP46597 345 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 TXNL4AP83876 142 aaKnown RBP17.78■□□□□ 0.44
COL5A3-201ENST00000264828 RGMBQ6NW40 437 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 DHX33Q9H6R0 707 aaKnown RBP17.78■□□□□ 0.44
COL5A3-201ENST00000264828 MRPS33Q9Y291 106 aaKnown RBP17.78■□□□□ 0.44
COL5A3-201ENST00000264828 TCAF1Q9Y4C2 921 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 PGLSO95336 258 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 AP2A1O95782 977 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 RPIAP49247 311 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 ACAP2Q15057 778 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 PARP15Q460N3 678 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 LAPTM4BQ86VI4 370 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 BTN2A3PQ96KV6 586 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.78■□□□□ 0.44
COL5A3-201ENST00000264828 CHMP1AQ9HD42 196 aaPredicted RBP17.78■□□□□ 0.44
COL5A3-201ENST00000264828 UCKL1Q9NWZ5 548 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 MRTO4Q9UKD2 239 aaKnown RBP17.78■□□□□ 0.44
COL5A3-201ENST00000264828 PCDHGB3Q9Y5G1 929 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 LRCH4O75427 683 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 ALAS2P22557 587 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 LIMK2P53671 638 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 ZNF567Q8N184 647 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 SUN5Q8TC36 379 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 IFT46Q9NQC8 304 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 SNTG1Q9NSN8 517 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 H3BNX3 289 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 CST3P01034 146 aaPredicted RBP17.78■□□□□ 0.44
COL5A3-201ENST00000264828 ADH1AP07327 375 aa17.78■□□□□ 0.44
COL5A3-201ENST00000264828 ATF4P18848 351 aaPredicted RBP17.78■□□□□ 0.44
COL5A3-201ENST00000264828 MTPNP58546 118 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms