RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 FLCNQ8NFG4 579 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 XAGE5Q8WWM1 108 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 FAM210AQ96ND0 272 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 TEFMQ96QE5 360 aaKnown RBP13.82□□□□□ -0.2
CDH3-201ENST00000264012 ERVK-6Q9BXR3 956 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 INSL6Q9Y581 213 aa13.82□□□□□ -0.2
CDH3-201ENST00000264012 RGPD5Q99666 1765 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 FFAR2O15552 330 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 MT-ND1P03886 318 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 HIST1H2ABP04908 130 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 SOX4Q06945 474 aaPredicted RBP13.81□□□□□ -0.2
CDH3-201ENST00000264012 LAPTM5Q13571 262 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 TRIM25Q14258 630 aaKnown RBP13.81□□□□□ -0.2
CDH3-201ENST00000264012 LDLRAP1Q5SW96 308 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 NEK10Q6ZWH5 1172 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 HIST3H2AQ7L7L0 130 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 ZNF461Q8TAF7 563 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 WFIKKN2Q8TEU8 576 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 HIST1H2ACQ93077 130 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 RAD51AP1Q96B01 352 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 RSPH9Q9H1X1 276 aaPredicted RBP13.81□□□□□ -0.2
CDH3-201ENST00000264012 EXD2Q9NVH0 621 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 IGKV6-21A0A0C4DH24 114 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 TRIM43BA6NCK2 446 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 IL6P05231 212 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 CCNA2P20248 432 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 MAGEA11P43364 429 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 LSM3P62310 102 aaKnown RBP13.81□□□□□ -0.2
CDH3-201ENST00000264012 ZNF33AQ06730 810 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 LYSMD3Q7Z3D4 306 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 SERINC5Q86VE9 423 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 ANKRD46Q86W74 232 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 FAM156AQ8NDB6 213 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 SIGLEC10Q96LC7 697 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 REXO4Q9GZR2 422 aaKnown RBP13.81□□□□□ -0.2
CDH3-201ENST00000264012 ADAMTS10Q9H324 1103 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 C11orf49Q9H6J7 331 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 IGKV6D-21A0A0A0MT36 114 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 FAM149AA5PLN7 773 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 KPNA4O00629 521 aaPredicted RBP13.81□□□□□ -0.2
CDH3-201ENST00000264012 ITM2AO43736 263 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 SIX3O95343 332 aaPredicted RBP13.81□□□□□ -0.2
CDH3-201ENST00000264012 GNAZP19086 355 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 TMEM198Q66K66 360 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 AGMOQ6ZNB7 445 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 WDTC1Q8N5D0 677 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 ADAMTS15Q8TE58 950 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 EQTNQ9NQ60 294 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 PCDHGA11Q9Y5H2 935 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 STX11O75558 287 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 CNTN5O94779 1100 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 MAPK12P53778 367 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 CSNK2BP67870 215 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 FPGSQ05932 587 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 KLF1Q13351 362 aaPredicted RBP13.81□□□□□ -0.2
CDH3-201ENST00000264012 UBXN11Q5T124 520 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 OR2AP1Q8NGE2 309 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 SLC22A17Q8WUG5 538 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 EXOSC8Q96B26 276 aaKnown RBP13.81□□□□□ -0.2
CDH3-201ENST00000264012 EBPLQ9BY08 206 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 SEC14L3Q9UDX4 400 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 CNOT6Q9ULM6 557 aaKnown RBP13.81□□□□□ -0.2
CDH3-201ENST00000264012 GNEQ9Y223 722 aaKnown RBP13.81□□□□□ -0.2
CDH3-201ENST00000264012 COLEC10Q9Y6Z7 277 aa13.81□□□□□ -0.2
CDH3-201ENST00000264012 C5P01031 1676 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 A8MT66 165 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 K7EPI3 171 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 SLC31A1O15431 190 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 CCL5P13501 91 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 UPP1Q16831 310 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 MBLAC2Q68D91 279 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 VITQ6UXI7 678 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 RBM44Q6ZP01 1051 aaKnown RBP13.8□□□□□ -0.2
CDH3-201ENST00000264012 CHST15Q7LFX5 561 aaPredicted RBP13.8□□□□□ -0.2
CDH3-201ENST00000264012 ZNF280BQ86YH2 543 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 AMER2Q8N7J2 671 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 HERVK_113Q902F9 699 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 C8orf4Q9NR00 106 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 INTS7Q9NVH2 962 aaKnown RBP13.8□□□□□ -0.2
CDH3-201ENST00000264012 OGDHLQ9ULD0 1010 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 POMPQ9Y244 141 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 CENPXA8MT69 81 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 DNAJA2O60884 412 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 RASGRP1O95267 797 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 RPL4P36578 427 aaKnown RBP13.8□□□□□ -0.2
CDH3-201ENST00000264012 ILF3Q12906 894 aaKnown RBP eCLIP13.8□□□□□ -0.2
CDH3-201ENST00000264012 FAM174BQ3ZCQ3 159 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 LDLRAD1Q5T700 205 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 HIPK1Q86Z02 1210 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 SLITRK2Q9H156 845 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 OR2AG1Q9H205 316 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 SH3GLB1Q9Y371 365 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 ZNF487B1APH4 448 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 GPIP06744 558 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 PRKCHP24723 683 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 PNLIPRP1P54315 467 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 SEC13P55735 322 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 CYP4F3Q08477 520 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 GPR107Q5VW38 600 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 KHDRBS2Q5VWX1 349 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms