RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 TMC3Q7Z5M5 1100 aa16.34■□□□□ 0.21
USP13-201ENST00000263966 PCDHGA6Q9Y5G7 932 aa16.34■□□□□ 0.21
USP13-201ENST00000263966 CCZ1BP86790 482 aa16.33■□□□□ 0.21
USP13-201ENST00000263966 CCZ1P86791 482 aaPredicted RBP16.33■□□□□ 0.21
USP13-201ENST00000263966 TMEM44Q2T9K0 475 aa16.33■□□□□ 0.21
USP13-201ENST00000263966 SLC39A3Q9BRY0 314 aa16.33■□□□□ 0.21
USP13-201ENST00000263966 PEX11AO75192 247 aa16.33■□□□□ 0.21
USP13-201ENST00000263966 MAT2AP31153 395 aaKnown RBP16.33■□□□□ 0.21
USP13-201ENST00000263966 ARHGAP40Q5TG30 622 aa16.33■□□□□ 0.21
USP13-201ENST00000263966 OTOP1Q7RTM1 612 aa16.33■□□□□ 0.21
USP13-201ENST00000263966 GPAT4Q86UL3 456 aa16.33■□□□□ 0.21
USP13-201ENST00000263966 FTMTQ8N4E7 242 aa16.33■□□□□ 0.21
USP13-201ENST00000263966 ZBTB2Q8N680 514 aa16.33■□□□□ 0.21
USP13-201ENST00000263966 METTL7AQ9H8H3 244 aa16.33■□□□□ 0.21
USP13-201ENST00000263966 LRTM1Q9HBL6 345 aa16.33■□□□□ 0.21
USP13-201ENST00000263966 ATXN2Q99700 1313 aaKnown RBP16.33■□□□□ 0.21
USP13-201ENST00000263966 TUSC3Q13454 348 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 NPIPA5E9PKD4 350 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 PAGE1O75459 146 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 APLP1P51693 650 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 CASP5P51878 434 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 GALK2Q01415 458 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 CD99L2Q8TCZ2 262 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 SEMA6AQ9H2E6 1030 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 RCOR3Q9P2K3 495 aaPredicted RBP16.33■□□□□ 0.2
USP13-201ENST00000263966 NPIPA1Q9UND3 350 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 CNTNAP1P78357 1384 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 NWD1Q149M9 1564 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 COQ9O75208 318 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 RBMS1P29558 406 aaKnown RBP16.33■□□□□ 0.2
USP13-201ENST00000263966 CDK9P50750 372 aaKnown RBP16.33■□□□□ 0.2
USP13-201ENST00000263966 SOX10P56693 466 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 CDK18Q07002 472 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 DNAJB7Q7Z6W7 309 aaPredicted RBP16.33■□□□□ 0.2
USP13-201ENST00000263966 NPAS4Q8IUM7 802 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 IL22RA1Q8N6P7 574 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 ZNF398Q8TD17 642 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 SLC38A4Q969I6 547 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 KCNIP3Q9Y2W7 256 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 RBM47A0AV96 593 aaKnown RBP16.33■□□□□ 0.2
USP13-201ENST00000263966 MUSKO15146 869 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 C8GP07360 202 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 S100A2P29034 98 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 CRISP1P54107 249 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 TXNL4AP83876 142 aaKnown RBP16.33■□□□□ 0.2
USP13-201ENST00000263966 LIPEQ05469 1076 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 CEP97Q8IW35 865 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 C2orf73Q8N5S3 287 aaPredicted RBP16.33■□□□□ 0.2
USP13-201ENST00000263966 GPR151Q8TDV0 419 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 ZNF180Q9UJW8 692 aa16.33■□□□□ 0.2
USP13-201ENST00000263966 ADAMTS3O15072 1205 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 MMP3P08254 477 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 RBL1P28749 1068 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 PAOXQ6QHF9 649 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 C7orf57Q8NEG2 295 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 C11orf49Q9H6J7 331 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 NT5C1B-RDH14C9J2C7 533 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 AKAP3O75969 853 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 ITGA2BP08514 1039 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 LINC00032P0C843 101 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 LNX2Q8N448 690 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 ZMIZ2Q8NF64 920 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 OR6K2Q8NGY2 324 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 DNAJC5Q9H3Z4 198 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 SPAG17Q6Q759 2223 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 ABCA9Q8IUA7 1624 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 SYPP08247 313 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 ZNF35P13682 527 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 ALADP13716 330 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 CATSPERGQ6ZRH7 1159 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 MAGEL2Q9UJ55 1249 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 TRBV23OR9-2A0A075B6M9 112 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 PROCP04070 461 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 LRIF1Q5T3J3 769 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 PRSS58Q8IYP2 241 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 KLHL5Q96PQ7 755 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 MUC13Q9H3R2 512 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 NENFQ9UMX5 172 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 POLR3HQ9Y535 204 aaPredicted RBP16.32■□□□□ 0.2
USP13-201ENST00000263966 KIF1AQ12756 1690 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 NOS1APO75052 506 aaPredicted RBP16.32■□□□□ 0.2
USP13-201ENST00000263966 CPNE3O75131 537 aaKnown RBP16.32■□□□□ 0.2
USP13-201ENST00000263966 LPLP06858 475 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 KIR3DL1P43629 444 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 SLC34A1Q06495 639 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 FAM131AQ6UXB0 335 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 CHERPQ8IWX8 916 aaKnown RBP16.32■□□□□ 0.2
USP13-201ENST00000263966 GHDCQ8N2G8 530 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 VANGL1Q8TAA9 524 aaPredicted RBP16.32■□□□□ 0.2
USP13-201ENST00000263966 DNAJA2O60884 412 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 SSTR1P30872 391 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 RIDAP52758 137 aaKnown RBP16.32■□□□□ 0.2
USP13-201ENST00000263966 UNC5AQ6ZN44 842 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 ZER1Q7Z7L7 766 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 MRPL41Q8IXM3 137 aaKnown RBP16.32■□□□□ 0.2
USP13-201ENST00000263966 OR52K2Q8NGK3 314 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 WDR12Q9GZL7 423 aaKnown RBP16.32■□□□□ 0.2
USP13-201ENST00000263966 LYARQ9NX58 379 aaKnown RBP16.32■□□□□ 0.2
USP13-201ENST00000263966 ADGRE2Q9UHX3 823 aa16.32■□□□□ 0.2
USP13-201ENST00000263966 MAP4K5Q9Y4K4 846 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms