RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 XKR5Q6UX68 686 aa18.02■□□□□ 0.48
SDF4-201ENST00000263741 AMZ2Q86W34 360 aa18.02■□□□□ 0.48
SDF4-201ENST00000263741 CCNJLQ8IV13 435 aa18.02■□□□□ 0.48
SDF4-201ENST00000263741 PALM2Q8IXS6 379 aa18.02■□□□□ 0.48
SDF4-201ENST00000263741 GPR150Q8NGU9 434 aa18.02■□□□□ 0.48
SDF4-201ENST00000263741 GSDMBQ8TAX9 411 aa18.02■□□□□ 0.48
SDF4-201ENST00000263741 BAHD1Q8TBE0 780 aaPredicted RBP18.02■□□□□ 0.48
SDF4-201ENST00000263741 LPGAT1Q92604 370 aa18.02■□□□□ 0.48
SDF4-201ENST00000263741 CNDP2Q96KP4 475 aaKnown RBP18.02■□□□□ 0.48
SDF4-201ENST00000263741 TIMM29Q9BSF4 260 aa18.02■□□□□ 0.48
SDF4-201ENST00000263741 FTSJ1Q9UET6 329 aa18.02■□□□□ 0.48
SDF4-201ENST00000263741 LY6G6EA0A0G2JKS1 128 aa18.02■□□□□ 0.47
SDF4-201ENST00000263741 MYBL2P10244 700 aa18.02■□□□□ 0.47
SDF4-201ENST00000263741 ALPPL2P10696 532 aa18.02■□□□□ 0.47
SDF4-201ENST00000263741 MAZP56270 477 aaKnown RBP18.02■□□□□ 0.47
SDF4-201ENST00000263741 CUL1Q13616 776 aa18.02■□□□□ 0.47
SDF4-201ENST00000263741 CCDC157Q569K6 752 aa18.02■□□□□ 0.47
SDF4-201ENST00000263741 CTSL3PQ5NE16 218 aa18.02■□□□□ 0.47
SDF4-201ENST00000263741 SDCCAG8Q86SQ7 713 aaPredicted RBP18.02■□□□□ 0.47
SDF4-201ENST00000263741 HEXDCQ8WVB3 486 aa18.02■□□□□ 0.47
SDF4-201ENST00000263741 TTC1Q99614 292 aa18.02■□□□□ 0.47
SDF4-201ENST00000263741 FBXO5Q9UKT4 447 aa18.02■□□□□ 0.47
SDF4-201ENST00000263741 PSMD13Q9UNM6 376 aa18.02■□□□□ 0.47
SDF4-201ENST00000263741 U3KQA8 63 aa18.02■□□□□ 0.47
SDF4-201ENST00000263741 SPAARA0A1B0GVQ0 90 aa18.01■□□□□ 0.47
SDF4-201ENST00000263741 S1PR4O95977 384 aa18.01■□□□□ 0.47
SDF4-201ENST00000263741 FMO4P31512 558 aa18.01■□□□□ 0.47
SDF4-201ENST00000263741 CSE1LP55060 971 aaKnown RBP18.01■□□□□ 0.47
SDF4-201ENST00000263741 CBLBQ13191 982 aa18.01■□□□□ 0.47
SDF4-201ENST00000263741 PROX2Q3B8N5 592 aa18.01■□□□□ 0.47
SDF4-201ENST00000263741 ZCCHC8Q6NZY4 707 aaKnown RBP18.01■□□□□ 0.47
SDF4-201ENST00000263741 ZDHHC1Q8WTX9 485 aa18.01■□□□□ 0.47
SDF4-201ENST00000263741 ZNF514Q96K75 400 aaPredicted RBP18.01■□□□□ 0.47
SDF4-201ENST00000263741 FAM167BQ9BTA0 163 aa18.01■□□□□ 0.47
SDF4-201ENST00000263741 P2RY12Q9H244 342 aa18.01■□□□□ 0.47
SDF4-201ENST00000263741 SMYD2Q9NRG4 433 aa18.01■□□□□ 0.47
SDF4-201ENST00000263741 PDZK1P1A8MUH7 402 aa18■□□□□ 0.47
SDF4-201ENST00000263741 PRMT5O14744 637 aaPredicted RBP18■□□□□ 0.47
SDF4-201ENST00000263741 TPP1O14773 563 aa18■□□□□ 0.47
SDF4-201ENST00000263741 CASC3O15234 703 aaKnown RBP18■□□□□ 0.47
SDF4-201ENST00000263741 NOBOXO60393 691 aa18■□□□□ 0.47
SDF4-201ENST00000263741 FAM153BP0C7A2 387 aa18■□□□□ 0.47
SDF4-201ENST00000263741 NOVA1P51513 510 aaKnown RBP18■□□□□ 0.47
SDF4-201ENST00000263741 BOP1Q14137 746 aaKnown RBP18■□□□□ 0.47
SDF4-201ENST00000263741 FAM153CQ494X1 144 aa18■□□□□ 0.47
SDF4-201ENST00000263741 NAGSQ8N159 534 aa18■□□□□ 0.47
SDF4-201ENST00000263741 SCG3Q8WXD2 468 aaKnown RBP18■□□□□ 0.47
SDF4-201ENST00000263741 CAVIN3Q969G5 261 aa18■□□□□ 0.47
SDF4-201ENST00000263741 DUSP23Q9BVJ7 150 aa18■□□□□ 0.47
SDF4-201ENST00000263741 PHACTR1Q9C0D0 580 aa18■□□□□ 0.47
SDF4-201ENST00000263741 LRRC4CQ9HCJ2 640 aa18■□□□□ 0.47
SDF4-201ENST00000263741 SCHIP1Q9P0W5 487 aaPredicted RBP18■□□□□ 0.47
SDF4-201ENST00000263741 WDR37Q9Y2I8 494 aa18■□□□□ 0.47
SDF4-201ENST00000263741 PSAT1Q9Y617 370 aa18■□□□□ 0.47
SDF4-201ENST00000263741 PRR19A6NJB7 356 aa18■□□□□ 0.47
SDF4-201ENST00000263741 NIPSNAP2O75323 286 aa18■□□□□ 0.47
SDF4-201ENST00000263741 LDOC1O95751 146 aaPredicted RBP18■□□□□ 0.47
SDF4-201ENST00000263741 PREPP48147 710 aa18■□□□□ 0.47
SDF4-201ENST00000263741 TEDDM1Q5T9Z0 273 aa18■□□□□ 0.47
SDF4-201ENST00000263741 CNSTQ6PJW8 725 aa18■□□□□ 0.47
SDF4-201ENST00000263741 BIRC8Q96P09 236 aa18■□□□□ 0.47
SDF4-201ENST00000263741 FOXP3Q9BZS1 431 aa18■□□□□ 0.47
SDF4-201ENST00000263741 NINJ2Q9NZG7 142 aa18■□□□□ 0.47
SDF4-201ENST00000263741 UNC13CQ8NB66 2214 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 TCRBV9S1A1TA0A576 114 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 A6NCN8 305 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 MGAT4DA6NG13 374 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 HAUS5O94927 633 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 TRIM16O95361 564 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 GABRB3P28472 473 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 PPARGP37231 505 aaPredicted RBP17.99■□□□□ 0.47
SDF4-201ENST00000263741 DAB2P98082 770 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 EFTUD2Q15029 972 aaKnown RBP eCLIP17.99■□□□□ 0.472e-6■■■□□ 18.7
SDF4-201ENST00000263741 KYNUQ16719 465 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 PTRHD1Q6GMV3 140 aaKnown RBP17.99■□□□□ 0.47
SDF4-201ENST00000263741 GUSBP11Q6P575 273 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 C3orf62Q6ZUJ4 267 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 CFAP206Q8IYR0 622 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 C2CD4AQ8NCU7 369 aaPredicted RBP17.99■□□□□ 0.47
SDF4-201ENST00000263741 SPDYE1Q8NFV5 336 aaPredicted RBP17.99■□□□□ 0.47
SDF4-201ENST00000263741 OR2L2Q8NH16 312 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 CALML6Q8TD86 181 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 ELMO1Q92556 727 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 ATXN7L3BQ96GX2 97 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 NDNQ99608 321 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 CCM2Q9BSQ5 444 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 CDC42EP4Q9H3Q1 356 aaKnown RBP17.99■□□□□ 0.47
SDF4-201ENST00000263741 VPS37BQ9H9H4 285 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 MOCS1Q9NZB8 636 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 OR52A4PA6NMU1 304 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 CXorf49A8MYA2 514 aaPredicted RBP17.99■□□□□ 0.47
SDF4-201ENST00000263741 AP2A2O94973 939 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 OR56A5P0C7T3 313 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 BRAFP15056 766 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 RNF187Q5TA31 235 aaPredicted RBP17.99■□□□□ 0.47
SDF4-201ENST00000263741 ZNF549Q6P9A3 640 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 LVRNQ6Q4G3 990 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 ARL10Q8N8L6 244 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 SLC37A2Q8TED4 501 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 LINC00615Q96LM1 132 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms