RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 NELFEP18615 380 aaKnown RBP11.99□□□□□ -0.49
TRAF4-202ENST00000262396 LPOP22079 712 aaPredicted RBP11.99□□□□□ -0.49
TRAF4-202ENST00000262396 CASRP41180 1078 aa11.99□□□□□ -0.49
TRAF4-202ENST00000262396 WASHC5Q12768 1159 aa11.99□□□□□ -0.49
TRAF4-202ENST00000262396 KLRB1Q12918 225 aa11.99□□□□□ -0.49
TRAF4-202ENST00000262396 DNASE1L3Q13609 305 aa11.99□□□□□ -0.49
TRAF4-202ENST00000262396 NFE2L1Q14494 772 aa11.99□□□□□ -0.49
TRAF4-202ENST00000262396 RPE65Q16518 533 aa11.99□□□□□ -0.49
TRAF4-202ENST00000262396 KHDC1Q4VXA5 237 aaKnown RBP11.99□□□□□ -0.49
TRAF4-202ENST00000262396 DARS2Q6PI48 645 aaKnown RBP11.99□□□□□ -0.49
TRAF4-202ENST00000262396 KDELC1Q6UW63 502 aa11.99□□□□□ -0.49
TRAF4-202ENST00000262396 HOOK3Q86VS8 718 aa11.99□□□□□ -0.49
TRAF4-202ENST00000262396 ATCAYQ86WG3 371 aa11.99□□□□□ -0.49
TRAF4-202ENST00000262396 TMEM126BQ8IUX1 230 aa11.99□□□□□ -0.49
TRAF4-202ENST00000262396 CDKL3Q8IVW4 592 aaPredicted RBP11.99□□□□□ -0.49
TRAF4-202ENST00000262396 RASGEF1AQ8N9B8 481 aa11.99□□□□□ -0.49
TRAF4-202ENST00000262396 SEC14L1Q92503 715 aa11.99□□□□□ -0.49
TRAF4-202ENST00000262396 TADA1Q96BN2 335 aa11.99□□□□□ -0.49
TRAF4-202ENST00000262396 MRGPRX2Q96LB1 330 aa11.99□□□□□ -0.49
TRAF4-202ENST00000262396 QKIQ96PU8 341 aaKnown RBP eCLIP11.99□□□□□ -0.49
TRAF4-202ENST00000262396 ALS2CR12Q96Q35 445 aa11.99□□□□□ -0.49
TRAF4-202ENST00000262396 WWP1Q9H0M0 922 aa11.99□□□□□ -0.49
TRAF4-202ENST00000262396 EPN3Q9H201 632 aa11.99□□□□□ -0.49
TRAF4-202ENST00000262396 IL17CQ9P0M4 197 aa11.99□□□□□ -0.49
TRAF4-202ENST00000262396 EPHA6Q9UF33 1036 aa11.99□□□□□ -0.49
TRAF4-202ENST00000262396 ACSL5Q9ULC5 683 aa11.99□□□□□ -0.49
TRAF4-202ENST00000262396 G3BP2Q9UN86 482 aaKnown RBP11.99□□□□□ -0.49
TRAF4-202ENST00000262396 WDR37Q9Y2I8 494 aa11.99□□□□□ -0.49
TRAF4-202ENST00000262396 AAR2Q9Y312 384 aaKnown RBP11.99□□□□□ -0.49
TRAF4-202ENST00000262396 hCG_1818297A0A087WSY0 165 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 KLHL33A6NCF5 533 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 OR6C74A6NCV1 312 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 IFRD1O00458 451 aaPredicted RBP11.98□□□□□ -0.49
TRAF4-202ENST00000262396 RFPL1O75677 317 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 AGTP01019 485 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 NTRK1P04629 796 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 KLK3P07288 261 aaPredicted RBP11.98□□□□□ -0.49
TRAF4-202ENST00000262396 PYGMP11217 842 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 MTHFD1P11586 935 aaKnown RBP11.98□□□□□ -0.49
TRAF4-202ENST00000262396 FGF5P12034 268 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 RBL1P28749 1068 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 CD68P34810 354 aaPredicted RBP11.98□□□□□ -0.49
TRAF4-202ENST00000262396 CTSCP53634 463 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 HSD11B2P80365 405 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 TMPRSS15P98073 1019 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 KCNAB1Q14722 419 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 CRTC2Q53ET0 693 aaPredicted RBP11.98□□□□□ -0.49
TRAF4-202ENST00000262396 BPHLQ86WA6 291 aaPredicted RBP11.98□□□□□ -0.49
TRAF4-202ENST00000262396 KMT5CQ86Y97 462 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 CFAP206Q8IYR0 622 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 KATNAL2Q8IYT4 538 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 EFCAB3Q8N7B9 438 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 DDHD1Q8NEL9 900 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 OR4K2Q8NGD2 314 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 KLHL6Q8WZ60 621 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 N4BP2L2Q92802 583 aaPredicted RBP11.98□□□□□ -0.49
TRAF4-202ENST00000262396 MR1Q95460 341 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 ULK4Q96C45 1275 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 PPP1R2P1Q96PQ5 205 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 CD180Q99467 661 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 MAP3K3Q99759 626 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 SPRY4Q9C004 299 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 RAB33BQ9H082 229 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 GOLPH3Q9H4A6 298 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 VPS37BQ9H9H4 285 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 LHX9Q9NQ69 397 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 FGF21Q9NSA1 209 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 TP53TG5Q9Y2B4 290 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 HEBP2Q9Y5Z4 205 aa11.98□□□□□ -0.49
TRAF4-202ENST00000262396 SETXQ7Z333 2677 aaKnown RBP11.97□□□□□ -0.49
TRAF4-202ENST00000262396 IGHV5-51A0A0C4DH38 117 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 GSAPA4D1B5 854 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 C5orf60A6NFR6 353 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 MGAT4DA6NG13 374 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 TLCD2A6NGC4 264 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 C21orf140B9A014 251 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 KCNN4O15554 427 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 GPR39O43194 453 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 CPNE3O75131 537 aaKnown RBP11.97□□□□□ -0.49
TRAF4-202ENST00000262396 CREG1O75629 220 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 SCRG1O75711 98 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 EBLN1P0CF75 366 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 FOLR1P15328 257 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 ITGALP20701 1170 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 CDH3P22223 829 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 F8A1P23610 371 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 NDUFS1P28331 727 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 EIF3EP60228 445 aaKnown RBP11.97□□□□□ -0.49
TRAF4-202ENST00000262396 DMPKQ09013 629 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 TAF1AQ15573 450 aaPredicted RBP11.97□□□□□ -0.49
TRAF4-202ENST00000262396 IGFBP7Q16270 282 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 COLEC12Q5KU26 742 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 ASB18Q6ZVZ8 466 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 C11orf96Q7Z7L8 435 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 GPR150Q8NGU9 434 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 DTX3LQ8TDB6 740 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 CT55Q8WUE5 264 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 HEXDCQ8WVB3 486 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 CLIP3Q96DZ5 547 aa11.97□□□□□ -0.49
TRAF4-202ENST00000262396 OXNAD1Q96HP4 312 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms