RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 ESR1P03372 595 aa27.07■■□□□ 1.92
SMARCD3-201ENST00000262188 WNT1P04628 370 aa27.07■■□□□ 1.92
SMARCD3-201ENST00000262188 CHRM3P20309 590 aa27.07■■□□□ 1.92
SMARCD3-201ENST00000262188 RPS3P23396 243 aaKnown RBP eCLIP27.07■■□□□ 1.92
SMARCD3-201ENST00000262188 PBLDP30039 288 aaPredicted RBP27.07■■□□□ 1.92
SMARCD3-201ENST00000262188 DHPSP49366 369 aaPredicted RBP27.07■■□□□ 1.92
SMARCD3-201ENST00000262188 TAOK1Q7L7X3 1001 aa27.07■■□□□ 1.92
SMARCD3-201ENST00000262188 TRABD2AQ86V40 505 aa27.07■■□□□ 1.92
SMARCD3-201ENST00000262188 SCG3Q8WXD2 468 aaKnown RBP27.07■■□□□ 1.92
SMARCD3-201ENST00000262188 PGM2Q96G03 612 aa27.07■■□□□ 1.92
SMARCD3-201ENST00000262188 ZNF570Q96NI8 536 aa27.07■■□□□ 1.92
SMARCD3-201ENST00000262188 BAIAP2L1Q9UHR4 511 aa27.07■■□□□ 1.92
SMARCD3-201ENST00000262188 GNPTGQ9UJJ9 305 aa27.07■■□□□ 1.92
SMARCD3-201ENST00000262188 CFAP99D6REC4 459 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 PYGBP11216 843 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 RALBP11234 206 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 TEAD1P28347 426 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 ADARP55265 1226 aaKnown RBP27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 IRF9Q00978 393 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 LGSNQ5TDP6 509 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 TMEM207Q6UWW9 146 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 LPCAT2Q7L5N7 544 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 ABI3BPQ7Z7G0 1075 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 TRAPPC5Q8IUR0 188 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 ZNF547Q8IVP9 402 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 SPATA6LQ8N4H0 392 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 FGF22Q9HCT0 170 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 HS3ST3A1Q9Y663 406 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 CACNB4O00305 520 aaPredicted RBP27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 MT-ND3P03897 115 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 FDXRP22570 491 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 TYK2P29597 1187 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 GUCY1A3Q02108 690 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 TNFAIP8L3Q5GJ75 292 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 FAM45BPQ6NSW5 357 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 MACC1Q6ZN28 852 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 FAM45AQ8TCE6 357 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 NELL1Q92832 810 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 PCED1AQ9H1Q7 454 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 PCMTD2Q9NV79 361 aa27.06■■□□□ 1.92
SMARCD3-201ENST00000262188 CEACAM5P06731 702 aa27.05■■□□□ 1.92
SMARCD3-201ENST00000262188 CNTFP26441 200 aa27.05■■□□□ 1.92
SMARCD3-201ENST00000262188 PLK5Q496M5 336 aa27.05■■□□□ 1.92
SMARCD3-201ENST00000262188 ENPP7Q6UWV6 458 aa27.05■■□□□ 1.92
SMARCD3-201ENST00000262188 KYAT3Q6YP21 454 aaKnown RBP27.05■■□□□ 1.92
SMARCD3-201ENST00000262188 EXOC3L1Q86VI1 746 aa27.05■■□□□ 1.92
SMARCD3-201ENST00000262188 LILRA3Q8N6C8 439 aaPredicted RBP27.05■■□□□ 1.92
SMARCD3-201ENST00000262188 TM9SF3Q9HD45 589 aa27.05■■□□□ 1.92
SMARCD3-201ENST00000262188 PCDHB1Q9Y5F3 818 aa27.05■■□□□ 1.92
SMARCD3-201ENST00000262188 KNL1Q8NG31 2342 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 E5RI56 91 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 LILRB5O75023 590 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 THEGLP0DJG4 465 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 SERPINB8P50452 374 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 MAGOHP61326 146 aaKnown RBP27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 MRPS35P82673 323 aaKnown RBP27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 NFATC4Q14934 902 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 LPAL2Q16609 132 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 PMS2CLQ68D20 193 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 RAPH1Q70E73 1250 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 C1orf216Q8TAB5 229 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 TSACCQ96A04 125 aaPredicted RBP27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 PDXPQ96GD0 296 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 SEC16BQ96JE7 1060 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 VPS11Q9H270 941 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 PRR33A8MZF0 331 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 SMIM24O75264 130 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 STMN1P16949 149 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 KRT4P19013 534 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 ATP1A2P50993 1020 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 SLC12A2P55011 1212 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 POU4F1Q01851 419 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 ZNF542PQ5EBM4 170 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 CEP68Q76N32 757 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 RD3Q7Z3Z2 195 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 MTBPQ96DY7 904 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 C12orf65Q9H3J6 166 aaKnown RBP27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 ZSCAN32Q9NX65 697 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 ZNHIT2Q9UHR6 403 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 PLEKHM1Q9Y4G2 1056 aa27.04■■□□□ 1.92
SMARCD3-201ENST00000262188 SPAG7O75391 227 aa27.03■■□□□ 1.92
SMARCD3-201ENST00000262188 C2P06681 752 aa27.03■■□□□ 1.92
SMARCD3-201ENST00000262188 OR56A5P0C7T3 313 aa27.03■■□□□ 1.92
SMARCD3-201ENST00000262188 SLC35E2BP0CK96 405 aa27.03■■□□□ 1.92
SMARCD3-201ENST00000262188 CCR7P32248 378 aa27.03■■□□□ 1.92
SMARCD3-201ENST00000262188 RANBP1P43487 201 aa27.03■■□□□ 1.92
SMARCD3-201ENST00000262188 CLCN7P51798 805 aa27.03■■□□□ 1.92
SMARCD3-201ENST00000262188 THOP1P52888 689 aa27.03■■□□□ 1.92
SMARCD3-201ENST00000262188 RAB10P61026 200 aa27.03■■□□□ 1.92
SMARCD3-201ENST00000262188 GTF2H3Q13889 308 aa27.03■■□□□ 1.92
SMARCD3-201ENST00000262188 GKAP1Q5VSY0 366 aaPredicted RBP27.03■■□□□ 1.92
SMARCD3-201ENST00000262188 ANKRD49Q8WVL7 239 aa27.03■■□□□ 1.92
SMARCD3-201ENST00000262188 OR1E3Q8WZA6 343 aa27.03■■□□□ 1.92
SMARCD3-201ENST00000262188 SLC13A1Q9BZW2 595 aa27.03■■□□□ 1.92
SMARCD3-201ENST00000262188 TMEM74BQ9NUR3 256 aa27.03■■□□□ 1.92
SMARCD3-201ENST00000262188 VEGFDO43915 354 aa27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 NUAK1O60285 661 aa27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 PAQR3Q6TCH7 311 aa27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 SH2D5Q6ZV89 423 aa27.02■■□□□ 1.92
SMARCD3-201ENST00000262188 CROCCP2Q86T23 111 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms