RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 CRHBPP24387 322 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 GTF2E2P29084 291 aaKnown RBP12.82□□□□□ -0.36
SNX1-201ENST00000261889 ZFP36L2P47974 494 aaKnown RBP12.82□□□□□ -0.36
SNX1-201ENST00000261889 VAC14Q08AM6 782 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 RAPSNQ13702 412 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 UAP1L1Q3KQV9 507 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 FAM174BQ3ZCQ3 159 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 ZRANB3Q5FWF4 1079 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 ZNF773Q6PK81 442 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 AQP12AQ8IXF9 295 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 KCTD13Q8WZ19 329 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 FAM162AQ96A26 154 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 ROPN1LQ96C74 230 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 ROGDIQ9GZN7 287 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 CCDC68Q9H2F9 335 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 ST3GAL5Q9UNP4 418 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 ERGIC3Q9Y282 383 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 CPQQ9Y646 472 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 GABRDO14764 452 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 NBNO60934 754 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 DNTTP04053 509 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 GP2P55259 537 aaKnown RBP12.82□□□□□ -0.36
SNX1-201ENST00000261889 ERVPABLB-1P60509 514 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 ADARB1P78563 741 aaKnown RBP12.82□□□□□ -0.36
SNX1-201ENST00000261889 NOGQ13253 232 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 GRB14Q14449 540 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 CYP27C1Q4G0S4 372 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 C6orf136Q5SQH8 315 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 MORN1Q5T089 497 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 SULT1C3Q6IMI6 304 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 LAIR2Q6ISS4 152 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 DHRS4L2Q6PKH6 230 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 PAGE2Q7Z2X7 111 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 SLC22A16Q86VW1 577 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 C8orf59Q8N0T1 100 aaPredicted RBP12.82□□□□□ -0.36
SNX1-201ENST00000261889 CACTIN-AS1Q8N1I8 211 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 LINGO1Q96FE5 620 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 FAR2Q96K12 515 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 ALPK1Q96QP1 1244 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 ATOH8Q96SQ7 321 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 HOPXQ9BPY8 73 aaPredicted RBP12.82□□□□□ -0.36
SNX1-201ENST00000261889 VNN3Q9NY84 501 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 HACD3Q9P035 362 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 PSME2Q9UL46 239 aa12.82□□□□□ -0.36
SNX1-201ENST00000261889 HTR3EA5X5Y0 456 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 MYADML2A6NDP7 307 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 CTGFP29279 349 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 PSMD8P48556 350 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 DMPKQ09013 629 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 LCP2Q13094 533 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 ABRAXAS2Q15018 415 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 TRIP4Q15650 581 aaPredicted RBP12.81□□□□□ -0.36
SNX1-201ENST00000261889 MOGQ16653 247 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 AP5B1Q2VPB7 878 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 ADPRMQ3LIE5 342 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 ANKS6Q68DC2 871 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 MINDY1Q8N5J2 469 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 TOP6BLQ8N6T0 577 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 CHDHQ8NE62 594 aaPredicted RBP12.81□□□□□ -0.36
SNX1-201ENST00000261889 SH3YL1Q96HL8 342 aaPredicted RBP12.81□□□□□ -0.36
SNX1-201ENST00000261889 M0R3G1 203 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 SSX4O60224 188 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 BNIP3LO60238 219 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 B4GALT3O60512 393 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 SULT1C4O75897 302 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 ALPLP05186 524 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 OR1E1P30953 314 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 PNPLA4P41247 253 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 HSPA7P48741 367 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 CHRNB3Q05901 458 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 SFSWAPQ12872 951 aaKnown RBP12.81□□□□□ -0.36
SNX1-201ENST00000261889 DAG1Q14118 895 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 MFSD10Q14728 455 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 ZNF792Q3KQV3 632 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 SPANXN4Q5MJ08 99 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 KANK2Q63ZY3 851 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 IQSEC1Q6DN90 963 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 SLC16A12Q6ZSM3 486 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 Q6ZSR9 355 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 THAP5Q7Z6K1 395 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 LPCAT1Q8NF37 534 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 GPRC5AQ8NFJ5 357 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 SLC35B4Q969S0 331 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 TSPAN17Q96FV3 270 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 MAML3Q96JK9 1138 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 BDH2Q9BUT1 245 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 KATNBL1Q9H079 304 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 SLC52A3Q9NQ40 469 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 HPS4Q9NQG7 708 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 CATSPERZQ9NTU4 200 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 FKBPLQ9UIM3 349 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 PDE10AQ9Y233 779 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 MED16Q9Y2X0 877 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 TBX1O43435 398 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 GMNNO75496 209 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 LCKP06239 509 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 BMP4P12644 408 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 HSD17B1P14061 328 aa12.81□□□□□ -0.36
SNX1-201ENST00000261889 FSCN1Q16658 493 aaKnown RBP12.81□□□□□ -0.36
SNX1-201ENST00000261889 KYAT1Q16773 422 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms