RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 PNPLA1Q8N8W4 532 aa18.4■□□□□ 0.54
CYSTM1-201ENST00000261811 SLC37A2Q8TED4 501 aa18.4■□□□□ 0.54
CYSTM1-201ENST00000261811 PYROXD1Q8WU10 500 aa18.4■□□□□ 0.54
CYSTM1-201ENST00000261811 CCDC74AQ96AQ1 378 aa18.4■□□□□ 0.54
CYSTM1-201ENST00000261811 CXorf40BQ96DE9 158 aa18.4■□□□□ 0.54
CYSTM1-201ENST00000261811 CFAP36Q96G28 342 aa18.4■□□□□ 0.54
CYSTM1-201ENST00000261811 CCDC3Q9BQI4 270 aa18.4■□□□□ 0.54
CYSTM1-201ENST00000261811 CARD6Q9BX69 1037 aa18.4■□□□□ 0.54
CYSTM1-201ENST00000261811 TSPYL1Q9H0U9 437 aa18.4■□□□□ 0.54
CYSTM1-201ENST00000261811 CCDC68Q9H2F9 335 aa18.4■□□□□ 0.54
CYSTM1-201ENST00000261811 SARS2Q9NP81 518 aaKnown RBP18.4■□□□□ 0.54
CYSTM1-201ENST00000261811 GRHL1Q9NZI5 618 aa18.4■□□□□ 0.54
CYSTM1-201ENST00000261811 MARCH4Q9P2E8 410 aaPredicted RBP18.4■□□□□ 0.54
CYSTM1-201ENST00000261811 FAM8A1Q9UBU6 413 aa18.4■□□□□ 0.54
CYSTM1-201ENST00000261811 MTRF1LQ9UGC7 380 aaKnown RBP18.4■□□□□ 0.54
CYSTM1-201ENST00000261811 TRBV23OR9-2A0A075B6M9 112 aa18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 ESPNB1AK53 854 aa18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 E7ESA3 106 aa18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 IFRD1O00458 451 aaPredicted RBP18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 LIN7AO14910 233 aaPredicted RBP18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 ADRB1P08588 477 aa18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 RPS3P23396 243 aaKnown RBP eCLIP18.39■□□□□ 0.532e-7■■■■■ 30.8
CYSTM1-201ENST00000261811 ARNTP27540 789 aa18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 PPM1FP49593 454 aaPredicted RBP18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 HHEXQ03014 270 aa18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 FOXC1Q12948 553 aa18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 CBLBQ13191 982 aa18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 SEMA3AQ14563 771 aa18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 TMED2Q15363 201 aa18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 TYSND1Q2T9J0 566 aa18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 SYTL3Q4VX76 610 aa18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 DHRS13Q6UX07 377 aa18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 LDB1Q86U70 411 aaPredicted RBP18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 TMPRSS12Q86WS5 348 aa18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 AGGF1Q8N302 714 aaeCLIP18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 FBXO36Q8NEA4 188 aa18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 GSDMBQ8TAX9 411 aa18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 ELMO1Q92556 727 aa18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 SLC38A3Q99624 504 aa18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 EPB41L5Q9HCM4 733 aa18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 POT1Q9NUX5 634 aa18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 CPNE7Q9UBL6 633 aa18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 HEBP2Q9Y5Z4 205 aa18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 RNF215Q9Y6U7 377 aa18.39■□□□□ 0.53
CYSTM1-201ENST00000261811 A6NCN8 305 aa18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 SGTAO43765 313 aa18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 OPA1O60313 960 aa18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 OR1I1O60431 355 aa18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 BANF1O75531 89 aa18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 ESR1P03372 595 aa18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 ADARP55265 1226 aaKnown RBP18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 EIF3BP55884 814 aaKnown RBP18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 FOXK2Q01167 660 aa18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 HSP90AA5PQ58FG0 334 aa18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 HP1BP3Q5SSJ5 553 aaPredicted RBP18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 RAB44Q7Z6P3 723 aaPredicted RBP18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 ANKMY2Q8IV38 441 aa18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 NOA1Q8NC60 698 aaKnown RBP18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 ASZ1Q8WWH4 475 aa18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 PATE1Q8WXA2 126 aa18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 TMEM159Q96B96 161 aa18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 CERS2Q96G23 380 aa18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 PWWP2AQ96N64 755 aa18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 TRIM56Q9BRZ2 755 aaKnown RBP18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 SYNDIG1Q9H7V2 258 aa18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 COG4Q9H9E3 785 aa18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 SAYSD1Q9NPB0 183 aa18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 COLEC10Q9Y6Z7 277 aa18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 DCHS1Q96JQ0 3298 aa18.38■□□□□ 0.53
CYSTM1-201ENST00000261811 SPTBN2O15020 2390 aa18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 PRR19A6NJB7 356 aa18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 TP73O15350 636 aa18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 TCEA3O75764 348 aa18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 EML2O95834 649 aa18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 APOA4P06727 396 aa18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 JUPP14923 745 aa18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 ALDH4A1P30038 563 aa18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 SPIDRQ14159 915 aa18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 FRG1Q14331 258 aaKnown RBP18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 KRT33BQ14525 404 aa18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 PERM1Q5SV97 790 aa18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 UNC5AQ6ZN44 842 aa18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 ZNF438Q7Z4V0 828 aa18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 CCDC25Q86WR0 208 aa18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 FBXO25Q8TCJ0 367 aa18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 SEC14L1Q92503 715 aa18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 AHCYL2Q96HN2 611 aaKnown RBP18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 GFM1Q96RP9 751 aaKnown RBP18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 EPB41L1Q9H4G0 881 aa18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 IARS2Q9NSE4 1012 aaKnown RBP18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 KCNK4Q9NYG8 393 aa18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 PSMD13Q9UNM6 376 aa18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 COMMD10Q9Y6G5 202 aa18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 PRSS21Q9Y6M0 314 aa18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 KNTC1P50748 2209 aa18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 CACNA1AO00555 2505 aa18.37■□□□□ 0.53
CYSTM1-201ENST00000261811 E5RI56 91 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 GSTA2P09210 222 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 NDUFS1P28331 727 aa18.36■□□□□ 0.53
CYSTM1-201ENST00000261811 FMO4P31512 558 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms