RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 CTSCP53634 463 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 PRAMEP78395 509 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 INSCQ1MX18 579 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 C14orf28Q4W4Y0 310 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 ARMC3Q5W041 872 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 DHRS13Q6UX07 377 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 EFL1Q7Z2Z2 1120 aaKnown RBP16.5■□□□□ 0.23
SDCBP-201ENST00000260130 RAB44Q7Z6P3 723 aaPredicted RBP16.5■□□□□ 0.23
SDCBP-201ENST00000260130 C11orf96Q7Z7L8 435 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 CHCHD4Q8N4Q1 142 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 CCDC197Q8NCU1 140 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 OR6P1Q8NGX9 317 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 NAT6Q93015 286 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 SGF29Q96ES7 293 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 TIMM29Q9BSF4 260 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 MRM3Q9HC36 420 aaKnown RBP16.5■□□□□ 0.23
SDCBP-201ENST00000260130 TREX1Q9NSU2 369 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 ZDHHC3Q9NYG2 299 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 SOX13Q9UN79 622 aa16.5■□□□□ 0.23
SDCBP-201ENST00000260130 ZNF106Q9H2Y7 1883 aaKnown RBP16.49■□□□□ 0.23
SDCBP-201ENST00000260130 SDR42E2A6NKP2 422 aa16.49■□□□□ 0.23
SDCBP-201ENST00000260130 OR2AG2A6NM03 316 aa16.49■□□□□ 0.23
SDCBP-201ENST00000260130 CFAP99D6REC4 459 aa16.49■□□□□ 0.23
SDCBP-201ENST00000260130 NMBRP28336 390 aa16.49■□□□□ 0.23
SDCBP-201ENST00000260130 PMLP29590 882 aa16.49■□□□□ 0.23
SDCBP-201ENST00000260130 FOXN2P32314 431 aa16.49■□□□□ 0.23
SDCBP-201ENST00000260130 B4GALNT1Q00973 533 aa16.49■□□□□ 0.23
SDCBP-201ENST00000260130 E2F1Q01094 437 aa16.49■□□□□ 0.23
SDCBP-201ENST00000260130 PLA2G4EQ3MJ16 856 aa16.49■□□□□ 0.23
SDCBP-201ENST00000260130 FNBP1LQ5T0N5 605 aa16.49■□□□□ 0.23
SDCBP-201ENST00000260130 IZUMO3Q5VZ72 239 aa16.49■□□□□ 0.23
SDCBP-201ENST00000260130 AFTPHQ6ULP2 937 aa16.49■□□□□ 0.23
SDCBP-201ENST00000260130 DET1Q7L5Y6 550 aa16.49■□□□□ 0.23
SDCBP-201ENST00000260130 CCDC91Q7Z6B0 441 aa16.49■□□□□ 0.23
SDCBP-201ENST00000260130 NAGSQ8N159 534 aa16.49■□□□□ 0.23
SDCBP-201ENST00000260130 OR6C4Q8NGE1 309 aa16.49■□□□□ 0.23
SDCBP-201ENST00000260130 OR4L1Q8NH43 312 aa16.49■□□□□ 0.23
SDCBP-201ENST00000260130 ART4Q93070 314 aa16.49■□□□□ 0.23
SDCBP-201ENST00000260130 SGSM3Q96HU1 749 aa16.49■□□□□ 0.23
SDCBP-201ENST00000260130 SLC40A1Q9NP59 571 aa16.49■□□□□ 0.23
SDCBP-201ENST00000260130 DNMT3AQ9Y6K1 912 aaPredicted RBP16.49■□□□□ 0.23
SDCBP-201ENST00000260130 MYLKQ15746 1914 aa16.49■□□□□ 0.23
SDCBP-201ENST00000260130 MAGEB16A2A368 324 aa16.48■□□□□ 0.23
SDCBP-201ENST00000260130 MAGEA3P43357 314 aa16.48■□□□□ 0.23
SDCBP-201ENST00000260130 FOXK2Q01167 660 aa16.48■□□□□ 0.23
SDCBP-201ENST00000260130 CASC4Q6P4E1 433 aa16.48■□□□□ 0.23
SDCBP-201ENST00000260130 TAOK1Q7L7X3 1001 aa16.48■□□□□ 0.23
SDCBP-201ENST00000260130 C17orf82Q86X59 251 aaPredicted RBP16.48■□□□□ 0.23
SDCBP-201ENST00000260130 MPP5Q8N3R9 675 aa16.48■□□□□ 0.23
SDCBP-201ENST00000260130 ZNF317Q96PQ6 595 aaPredicted RBP16.48■□□□□ 0.23
SDCBP-201ENST00000260130 ROPN1BQ9BZX4 212 aaPredicted RBP16.48■□□□□ 0.23
SDCBP-201ENST00000260130 ROPN1Q9HAT0 212 aaPredicted RBP16.48■□□□□ 0.23
SDCBP-201ENST00000260130 TBC1D29Q9UFV1 150 aa16.48■□□□□ 0.23
SDCBP-201ENST00000260130 DNAJC16Q9Y2G8 782 aa16.48■□□□□ 0.23
SDCBP-201ENST00000260130 IGLV3-16A0A075B6K0 115 aa16.48■□□□□ 0.23
SDCBP-201ENST00000260130 RIPK2O43353 540 aa16.48■□□□□ 0.23
SDCBP-201ENST00000260130 KCNJ13O60928 360 aa16.48■□□□□ 0.23
SDCBP-201ENST00000260130 POP7O75817 140 aaKnown RBP16.48■□□□□ 0.23
SDCBP-201ENST00000260130 ATP1B2P14415 290 aaPredicted RBP16.48■□□□□ 0.23
SDCBP-201ENST00000260130 GLB1P16278 677 aa16.48■□□□□ 0.23
SDCBP-201ENST00000260130 VCLP18206 1134 aa16.48■□□□□ 0.23
SDCBP-201ENST00000260130 CALCOCO2Q13137 446 aa16.48■□□□□ 0.23
SDCBP-201ENST00000260130 AMZ2Q86W34 360 aa16.48■□□□□ 0.23
SDCBP-201ENST00000260130 PATE1Q8WXA2 126 aa16.48■□□□□ 0.23
SDCBP-201ENST00000260130 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.48■□□□□ 0.23
SDCBP-201ENST00000260130 MFSD3Q96ES6 412 aa16.48■□□□□ 0.23
SDCBP-201ENST00000260130 CCDC97Q96F63 343 aaPredicted RBP16.48■□□□□ 0.23
SDCBP-201ENST00000260130 OSGEPL1Q9H4B0 414 aa16.48■□□□□ 0.23
SDCBP-201ENST00000260130 CCDC134Q9H6E4 229 aa16.48■□□□□ 0.23
SDCBP-201ENST00000260130 INTS9Q9NV88 658 aaKnown RBP16.48■□□□□ 0.23
SDCBP-201ENST00000260130 SAMD15Q9P1V8 674 aa16.48■□□□□ 0.23
SDCBP-201ENST00000260130 WASF3Q9UPY6 502 aa16.48■□□□□ 0.23
SDCBP-201ENST00000260130 RASGRF2O14827 1237 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 HYAL3O43820 417 aaPredicted RBP16.47■□□□□ 0.23
SDCBP-201ENST00000260130 SNX2O60749 519 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 EML2O95834 649 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 TOP3BO95985 862 aaKnown RBP16.47■□□□□ 0.23
SDCBP-201ENST00000260130 SCTRP47872 440 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 MORF4L2Q15014 288 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 DBN1Q16643 649 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 FASTKD1Q53R41 847 aaKnown RBP16.47■□□□□ 0.23
SDCBP-201ENST00000260130 PERM1Q5SV97 790 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 CES3Q6UWW8 571 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 TRMT10CQ7L0Y3 403 aaKnown RBP16.47■□□□□ 0.23
SDCBP-201ENST00000260130 ARL14Q8N4G2 192 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 NAT14Q8WUY8 206 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 CCT6BQ92526 530 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 TTC1Q99614 292 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 NSRP1Q9H0G5 558 aaKnown RBP16.47■□□□□ 0.23
SDCBP-201ENST00000260130 ABCG4Q9H172 646 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 NCOR2Q9Y618 2525 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 PRR19A6NJB7 356 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 SMIM23A6NLE4 172 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 SGTAO43765 313 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 NUDT21O43809 227 aaKnown RBP16.47■□□□□ 0.23
SDCBP-201ENST00000260130 MAZP56270 477 aaKnown RBP16.47■□□□□ 0.23
SDCBP-201ENST00000260130 ITIH4Q14624 930 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 SMAD1Q15797 465 aaKnown RBP16.47■□□□□ 0.23
SDCBP-201ENST00000260130 BCL7AQ4VC05 210 aa16.47■□□□□ 0.23
SDCBP-201ENST00000260130 LYPLAL1Q5VWZ2 237 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms