RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 CAPN1P07384 714 aa18.43■□□□□ 0.54
PDLIM4-201ENST00000253754 ZNF7P17097 686 aaPredicted RBP18.43■□□□□ 0.54
PDLIM4-201ENST00000253754 SLC6A2P23975 617 aa18.43■□□□□ 0.54
PDLIM4-201ENST00000253754 SOX11P35716 441 aa18.43■□□□□ 0.54
PDLIM4-201ENST00000253754 GRIA2P42262 883 aa18.43■□□□□ 0.54
PDLIM4-201ENST00000253754 NRF1Q16656 503 aa18.43■□□□□ 0.54
PDLIM4-201ENST00000253754 PLEKHG6Q3KR16 790 aa18.43■□□□□ 0.54
PDLIM4-201ENST00000253754 HABP4Q5JVS0 413 aaKnown RBP18.43■□□□□ 0.54
PDLIM4-201ENST00000253754 ZNF697Q5TEC3 545 aa18.43■□□□□ 0.54
PDLIM4-201ENST00000253754 CERS6Q6ZMG9 384 aa18.43■□□□□ 0.54
PDLIM4-201ENST00000253754 GOLGA7Q7Z5G4 137 aa18.43■□□□□ 0.54
PDLIM4-201ENST00000253754 AMIGO2Q86SJ2 522 aa18.43■□□□□ 0.54
PDLIM4-201ENST00000253754 TMEM126BQ8IUX1 230 aa18.43■□□□□ 0.54
PDLIM4-201ENST00000253754 ZNF382Q96SR6 550 aa18.43■□□□□ 0.54
PDLIM4-201ENST00000253754 APOL5Q9BWW9 433 aa18.43■□□□□ 0.54
PDLIM4-201ENST00000253754 SLC46A2Q9BY10 475 aa18.43■□□□□ 0.54
PDLIM4-201ENST00000253754 ELOVL2Q9NXB9 296 aa18.43■□□□□ 0.54
PDLIM4-201ENST00000253754 SLAMF8Q9P0V8 285 aa18.43■□□□□ 0.54
PDLIM4-201ENST00000253754 ABCD2Q9UBJ2 740 aa18.43■□□□□ 0.54
PDLIM4-201ENST00000253754 CNOT6Q9ULM6 557 aaKnown RBP18.43■□□□□ 0.54
PDLIM4-201ENST00000253754 PCDHB1Q9Y5F3 818 aa18.43■□□□□ 0.54
PDLIM4-201ENST00000253754 SNX13Q9Y5W8 968 aa18.43■□□□□ 0.54
PDLIM4-201ENST00000253754 TRAV19A0A0A6YYK7 116 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 NPIPB15A6NHN6 443 aaPredicted RBP18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 OR7A17O14581 309 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 CASP2P42575 452 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 MTX3Q5HYI7 312 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 PAGE3Q5JUK9 113 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 Q6ZSR9 355 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 HTR3DQ70Z44 454 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 SPATA19Q7Z5L4 167 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 SNX20Q7Z614 316 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 ACDQ96AP0 544 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 EME1Q96AY2 570 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 LRRC58Q96CX6 371 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 TCEAL4Q96EI5 215 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 CNBD2Q96M20 576 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 CCL26Q9Y258 94 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 GLYATL1P3A0A0U1RQE8 302 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 FFAR2O15552 330 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 CAPNS1P04632 268 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 ITGALP20701 1170 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 ACRV1P26436 265 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 IL12AP29459 219 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 PBX2P40425 430 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 HSPA7P48741 367 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 CHN2P52757 468 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 GPM6BQ13491 265 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 RCAN2Q14206 197 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 GRM2Q14416 872 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 PHKG1Q16816 387 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 PLA2G4EQ3MJ16 856 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 RABL3Q5HYI8 236 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 LRRC73Q5JTD7 316 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 HMBOX1Q6NT76 420 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 RBFAQ8N0V3 343 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 FNDC5Q8NAU1 212 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 DNAJB14Q8TBM8 379 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 CANT1Q8WVQ1 401 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 GBP5Q96PP8 586 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 ATP13A3Q9H7F0 1226 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 ABCB8Q9NUT2 735 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 CRLS1Q9UJA2 301 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 GNPTGQ9UJJ9 305 aa18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 YBX2Q9Y2T7 364 aaKnown RBP18.42■□□□□ 0.54
PDLIM4-201ENST00000253754 LEFTY2O00292 366 aa18.41■□□□□ 0.54
PDLIM4-201ENST00000253754 DENRO43583 198 aaKnown RBP18.41■□□□□ 0.54
PDLIM4-201ENST00000253754 TIPRLO75663 272 aa18.41■□□□□ 0.54
PDLIM4-201ENST00000253754 GDF5P43026 501 aa18.41■□□□□ 0.54
PDLIM4-201ENST00000253754 SLC7A9P82251 487 aa18.41■□□□□ 0.54
PDLIM4-201ENST00000253754 AAK1Q2M2I8 961 aa18.41■□□□□ 0.54
PDLIM4-201ENST00000253754 TIGD2Q4W5G0 525 aa18.41■□□□□ 0.54
PDLIM4-201ENST00000253754 MPPE1Q53F39 396 aa18.41■□□□□ 0.54
PDLIM4-201ENST00000253754 C6orf136Q5SQH8 315 aa18.41■□□□□ 0.54
PDLIM4-201ENST00000253754 RFLNAQ6ZTI6 216 aa18.41■□□□□ 0.54
PDLIM4-201ENST00000253754 SPPL2CQ8IUH8 684 aa18.41■□□□□ 0.54
PDLIM4-201ENST00000253754 ADGRG2Q8IZP9 1017 aa18.41■□□□□ 0.54
PDLIM4-201ENST00000253754 SFRP1Q8N474 314 aa18.41■□□□□ 0.54
PDLIM4-201ENST00000253754 MINDY1Q8N5J2 469 aa18.41■□□□□ 0.54
PDLIM4-201ENST00000253754 OR4F6Q8NGB9 312 aa18.41■□□□□ 0.54
PDLIM4-201ENST00000253754 RIN3Q8TB24 985 aa18.41■□□□□ 0.54
PDLIM4-201ENST00000253754 METTL6Q8TCB7 284 aa18.41■□□□□ 0.54
PDLIM4-201ENST00000253754 PDLIM5Q96HC4 596 aaKnown RBP18.41■□□□□ 0.54
PDLIM4-201ENST00000253754 HOPXQ9BPY8 73 aaPredicted RBP18.41■□□□□ 0.54
PDLIM4-201ENST00000253754 SLC24A3Q9HC58 644 aa18.41■□□□□ 0.54
PDLIM4-201ENST00000253754 ZMYM5Q9UJ78 669 aa18.41■□□□□ 0.54
PDLIM4-201ENST00000253754 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.4■□□□□ 0.54
PDLIM4-201ENST00000253754 TAPBPO15533 448 aa18.4■□□□□ 0.54
PDLIM4-201ENST00000253754 SYNCRIPO60506 623 aaKnown RBP18.4■□□□□ 0.54
PDLIM4-201ENST00000253754 SLC22A3O75751 556 aa18.4■□□□□ 0.54
PDLIM4-201ENST00000253754 IGSF6O95976 241 aa18.4■□□□□ 0.54
PDLIM4-201ENST00000253754 ZNF26P17031 533 aaPredicted RBP18.4■□□□□ 0.54
PDLIM4-201ENST00000253754 PTPN2P17706 415 aa18.4■□□□□ 0.54
PDLIM4-201ENST00000253754 SLC7A1P30825 629 aa18.4■□□□□ 0.54
PDLIM4-201ENST00000253754 CCNHP51946 323 aaPredicted RBP18.4■□□□□ 0.54
PDLIM4-201ENST00000253754 KCNK10P57789 538 aa18.4■□□□□ 0.54
PDLIM4-201ENST00000253754 ERVK-8P63133 956 aa18.4■□□□□ 0.54
PDLIM4-201ENST00000253754 CREB5Q02930 508 aa18.4■□□□□ 0.54
PDLIM4-201ENST00000253754 GTF2H2Q13888 395 aa18.4■□□□□ 0.54
PDLIM4-201ENST00000253754 NFYCQ13952 458 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms