RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 CDKN3Q16667 212 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 AAK1Q2M2I8 961 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 MYLK3Q32MK0 819 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 SLC2A7Q6PXP3 512 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 ZFAND4Q86XD8 727 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 CBR4Q8N4T8 237 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 GOLM1Q8NBJ4 401 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 NMD3Q96D46 503 aaKnown RBP19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 KCTD14Q9BQ13 255 aaPredicted RBP19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 RBM38Q9H0Z9 239 aaKnown RBP19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 ACTL8Q9H568 366 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 SUN2Q9UH99 717 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 INSL5Q9Y5Q6 135 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 LAMA2P24043 3122 aaKnown RBP19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 LSM1O15116 133 aaKnown RBP19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 INPP4BO15327 924 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 TAPBPO15533 448 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 OLFM2O95897 454 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 RPS3P23396 243 aaKnown RBP eCLIP19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 HSPA7P48741 367 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 CYP51A1Q16850 503 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 DEFB115Q30KQ5 88 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 PDPRQ8NCN5 879 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 ANKRD60Q9BZ19 345 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 HEBP1Q9NRV9 189 aa19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 TNPO3Q9Y5L0 923 aaKnown RBP19.25■□□□□ 0.67
CDC42EP1-201ENST00000249014 A8MX80 341 aa19.24■□□□□ 0.67
CDC42EP1-201ENST00000249014 SLC25A14O95258 325 aaPredicted RBP19.24■□□□□ 0.67
CDC42EP1-201ENST00000249014 TRIM16O95361 564 aa19.24■□□□□ 0.67
CDC42EP1-201ENST00000249014 SPATA31D3P0C874 917 aa19.24■□□□□ 0.67
CDC42EP1-201ENST00000249014 G6PDP11413 515 aa19.24■□□□□ 0.67
CDC42EP1-201ENST00000249014 HNF1BP35680 557 aa19.24■□□□□ 0.67
CDC42EP1-201ENST00000249014 BCL2L1Q07817 233 aa19.24■□□□□ 0.67
CDC42EP1-201ENST00000249014 TRAF3Q13114 568 aa19.24■□□□□ 0.67
CDC42EP1-201ENST00000249014 PRKG2Q13237 762 aa19.24■□□□□ 0.67
CDC42EP1-201ENST00000249014 ABRAXAS2Q15018 415 aa19.24■□□□□ 0.67
CDC42EP1-201ENST00000249014 FAM43BQ6ZT52 329 aaPredicted RBP19.24■□□□□ 0.67
CDC42EP1-201ENST00000249014 SPATA31D4Q6ZUB0 917 aa19.24■□□□□ 0.67
CDC42EP1-201ENST00000249014 SNX20Q7Z614 316 aa19.24■□□□□ 0.67
CDC42EP1-201ENST00000249014 RBFAQ8N0V3 343 aa19.24■□□□□ 0.67
CDC42EP1-201ENST00000249014 TMEM169Q96HH4 297 aa19.24■□□□□ 0.67
CDC42EP1-201ENST00000249014 IPPKQ9H8X2 491 aa19.24■□□□□ 0.67
CDC42EP1-201ENST00000249014 OLAHQ9NV23 265 aa19.24■□□□□ 0.67
CDC42EP1-201ENST00000249014 PTBP2Q9UKA9 531 aaKnown RBP19.24■□□□□ 0.67
CDC42EP1-201ENST00000249014 PADI4Q9UM07 663 aa19.24■□□□□ 0.67
CDC42EP1-201ENST00000249014 RAD51BO15315 384 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 BPIP17213 487 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 FASP25445 335 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 EPHB3P54753 998 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 LSAMPQ13449 338 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 PHKG1Q16816 387 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 PLA2G4EQ3MJ16 856 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 INTS11Q5TA45 600 aaKnown RBP19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 ZSWIM9Q86XI8 627 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 FAM217AQ8IXS0 508 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 SLC39A11Q8N1S5 342 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 ZFP28Q8NHY6 868 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 DDI1Q8WTU0 396 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 TFAP2CQ92754 450 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 ISG20Q96AZ6 181 aaKnown RBP19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 C2orf49Q9BVC5 232 aaPredicted RBP19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 TNKS2Q9H2K2 1166 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 PIF1Q9H611 641 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 ZMYM5Q9UJ78 669 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 GNPTGQ9UJJ9 305 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 ZNF821O75541 412 aaPredicted RBP19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 RSL1D1O76021 490 aaKnown RBP19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 H6PDO95479 791 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 S100BP04271 92 aaPredicted RBP19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 ACRV1P26436 265 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 GDF5P43026 501 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 CCT8P50990 548 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 EEFSECP57772 596 aaKnown RBP19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 PLOD1Q02809 727 aaPredicted RBP19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 EMX2Q04743 252 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 NR6A1Q15406 480 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 RFTN2Q52LD8 501 aaPredicted RBP19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 RETSATQ6NUM9 610 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 FAM117BQ6P1L5 589 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 TRPV3Q8NET8 790 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 VWCEQ96DN2 955 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 MUC13Q9H3R2 512 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 DENND4CQ5VZ89 1909 aa19.23■□□□□ 0.67
CDC42EP1-201ENST00000249014 KIAA1671Q9BY89 1806 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 TRBV5-4A0A0C4DH59 114 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 GOLGA8CPA6NN73 597 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 ANKRD28O15084 1053 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 GLUD1P00367 558 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 GPIP06744 558 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 CYP4F8P98187 520 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 SEMG2Q02383 582 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 CYP20A1Q6UW02 462 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 DLEU7Q6UYE1 221 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 REM2Q8IYK8 340 aaPredicted RBP19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 TCEAL8Q8IYN2 117 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 MFSD2AQ8NA29 543 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 TSPAN14Q8NG11 270 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 CENPNQ96H22 339 aaPredicted RBP19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 APOL5Q9BWW9 433 aa19.22■□□□□ 0.67
CDC42EP1-201ENST00000249014 RPF2Q9H7B2 306 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms