RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 SFSWAPQ12872 951 aaKnown RBP16.65■□□□□ 0.26
SGPP1-201ENST00000247225 TRIP4Q15650 581 aaPredicted RBP16.65■□□□□ 0.26
SGPP1-201ENST00000247225 CYP20A1Q6UW02 462 aa16.65■□□□□ 0.26
SGPP1-201ENST00000247225 SPRED1Q7Z699 444 aa16.65■□□□□ 0.26
SGPP1-201ENST00000247225 RBM23Q86U06 439 aaKnown RBP16.65■□□□□ 0.26
SGPP1-201ENST00000247225 PHYKPLQ8IUZ5 450 aa16.65■□□□□ 0.26
SGPP1-201ENST00000247225 HID1Q8IV36 788 aa16.65■□□□□ 0.26
SGPP1-201ENST00000247225 FUBP1Q96AE4 644 aaKnown RBP16.65■□□□□ 0.26
SGPP1-201ENST00000247225 ULK4Q96C45 1275 aa16.65■□□□□ 0.26
SGPP1-201ENST00000247225 SLC47A1Q96FL8 570 aa16.65■□□□□ 0.26
SGPP1-201ENST00000247225 CGREF1Q99674 301 aa16.65■□□□□ 0.26
SGPP1-201ENST00000247225 TRIM54Q9BYV2 358 aa16.65■□□□□ 0.26
SGPP1-201ENST00000247225 ROGDIQ9GZN7 287 aa16.65■□□□□ 0.26
SGPP1-201ENST00000247225 IKZF5Q9H5V7 419 aa16.65■□□□□ 0.26
SGPP1-201ENST00000247225 CD320Q9NPF0 282 aa16.65■□□□□ 0.26
SGPP1-201ENST00000247225 PTBP2Q9UKA9 531 aaKnown RBP16.65■□□□□ 0.26
SGPP1-201ENST00000247225 MYADML2A6NDP7 307 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 C16orf96A6NNT2 1141 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 FAM155AB1AL88 458 aaPredicted RBP16.64■□□□□ 0.25
SGPP1-201ENST00000247225 STX7O15400 261 aaKnown RBP16.64■□□□□ 0.25
SGPP1-201ENST00000247225 FKBP9O95302 570 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 FDXRP22570 491 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 AQP1P29972 269 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 POLD2P49005 469 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 DGKEP52429 567 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 RPS24P62847 133 aaKnown RBP16.64■□□□□ 0.25
SGPP1-201ENST00000247225 NKG7Q16617 165 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 MAPKAPK3Q16644 382 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 CTU2Q2VPK5 515 aaKnown RBP16.64■□□□□ 0.25
SGPP1-201ENST00000247225 SPANXN4Q5MJ08 99 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 FKBP9P1Q75LS8 142 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 PLEKHH3Q7Z736 793 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 HEATR4Q86WZ0 1026 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 MICU2Q8IYU8 434 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 PACRGLQ8N7B6 248 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 CCDC97Q96F63 343 aaPredicted RBP16.64■□□□□ 0.25
SGPP1-201ENST00000247225 TSSK3Q96PN8 268 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 NODALQ96S42 347 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 NTN4Q9HB63 628 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 AIG1Q9NVV5 245 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 ERVK-18Q9QC07 812 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 ABCD2Q9UBJ2 740 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 PKP3Q9Y446 797 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 ORC6Q9Y5N6 252 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 VPS26AO75436 327 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 SERPINB7O75635 380 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 CAPNS1P04632 268 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 ABCB1P08183 1280 aaPredicted RBP16.64■□□□□ 0.25
SGPP1-201ENST00000247225 ABRAXAS2Q15018 415 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 IQSEC1Q6DN90 963 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 MBOAT1Q6ZNC8 495 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 Q8N9G6 341 aaPredicted RBP16.64■□□□□ 0.25
SGPP1-201ENST00000247225 IRGQQ8WZA9 623 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 PGAP3Q96FM1 320 aaPredicted RBP16.64■□□□□ 0.25
SGPP1-201ENST00000247225 NEURL2Q9BR09 285 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 C6orf62Q9GZU0 229 aaPredicted RBP16.64■□□□□ 0.25
SGPP1-201ENST00000247225 NSUN3Q9H649 340 aaKnown RBP16.64■□□□□ 0.25
SGPP1-201ENST00000247225 TUBA8Q9NY65 449 aaPredicted RBP16.64■□□□□ 0.25
SGPP1-201ENST00000247225 MARCH2Q9P0N8 246 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 MTRRQ9UBK8 725 aa16.64■□□□□ 0.25
SGPP1-201ENST00000247225 KRT87PA6NCN2 255 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 F2P00734 622 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 ALDH3A2P51648 485 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 IL2P60568 153 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 TIAL1Q01085 375 aaKnown RBP eCLIP16.63■□□□□ 0.25
SGPP1-201ENST00000247225 C6orf141Q5SZD1 244 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 MCOLN3Q8TDD5 553 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 RORBQ92753 470 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 ZBTB18Q99592 522 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 FAM118AQ9NWS6 357 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 DOCK1Q14185 1865 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 PFKLP17858 780 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 TPTEP56180 551 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 UPP1Q16831 310 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 BRMS1LQ5PSV4 323 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 ANGPTL8Q6UXH0 198 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 HACD2Q6Y1H2 254 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 OR4F6Q8NGB9 312 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 OR13F1Q8NGS4 319 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 SERPINB11Q96P15 392 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 YIPF2Q9BWQ6 316 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 AMBRA1Q9C0C7 1298 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 FLRT1Q9NZU1 646 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 LOC100506127A0A0U1RQW1 187 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 TCRBV5S2A0A599 114 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 NT5C1B-RDH14C9J2C7 533 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 DLGAP3O95886 979 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 ATXN1LP0C7T5 689 aaKnown RBP16.63■□□□□ 0.25
SGPP1-201ENST00000247225 BMP1P13497 986 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 ZNF12P17014 697 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 TTKP33981 857 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 RCVRNP35243 200 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 NEK2P51955 445 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 HK3P52790 923 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 STC1P52823 247 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 RCAN2Q14206 197 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 Q6ZSR9 355 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 RASAL3Q86YV0 1011 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 ARRDC2Q8TBH0 407 aa16.63■□□□□ 0.25
SGPP1-201ENST00000247225 DPF3Q92784 378 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms