RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 SPRED3Q2MJR0 410 aa23.39■■□□□ 1.33
RRP9-201ENST00000232888 KHDC1Q4VXA5 237 aaKnown RBP23.39■■□□□ 1.33
RRP9-201ENST00000232888 RAET1GQ6H3X3 334 aa23.39■■□□□ 1.33
RRP9-201ENST00000232888 TTC23LQ6PF05 361 aa23.39■■□□□ 1.33
RRP9-201ENST00000232888 ADAMTSL4Q6UY14 1074 aa23.39■■□□□ 1.33
RRP9-201ENST00000232888 ACAD11Q709F0 780 aa23.39■■□□□ 1.33
RRP9-201ENST00000232888 HOMEZQ8IX15 550 aa23.39■■□□□ 1.33
RRP9-201ENST00000232888 RASGEF1AQ8N9B8 481 aa23.39■■□□□ 1.33
RRP9-201ENST00000232888 ZNF483Q8TF39 744 aaPredicted RBP23.39■■□□□ 1.33
RRP9-201ENST00000232888 CCM2Q9BSQ5 444 aa23.39■■□□□ 1.33
RRP9-201ENST00000232888 TRAF6Q9Y4K3 522 aa23.39■■□□□ 1.33
RRP9-201ENST00000232888 FFAR2O15552 330 aa23.38■■□□□ 1.33
RRP9-201ENST00000232888 MTX2O75431 263 aa23.38■■□□□ 1.33
RRP9-201ENST00000232888 SIX3O95343 332 aaPredicted RBP23.38■■□□□ 1.33
RRP9-201ENST00000232888 HOXB2P14652 356 aa23.38■■□□□ 1.33
RRP9-201ENST00000232888 TEAD1P28347 426 aa23.38■■□□□ 1.33
RRP9-201ENST00000232888 CDKL1Q00532 357 aa23.38■■□□□ 1.33
RRP9-201ENST00000232888 CLCQ05315 142 aa23.38■■□□□ 1.33
RRP9-201ENST00000232888 BCL7AQ4VC05 210 aa23.38■■□□□ 1.33
RRP9-201ENST00000232888 SULT1C3Q6IMI6 304 aa23.38■■□□□ 1.33
RRP9-201ENST00000232888 CLYBLQ8N0X4 340 aa23.38■■□□□ 1.33
RRP9-201ENST00000232888 AGR3Q8TD06 166 aa23.38■■□□□ 1.33
RRP9-201ENST00000232888 NAT14Q8WUY8 206 aa23.38■■□□□ 1.33
RRP9-201ENST00000232888 FAM161BQ96MY7 647 aa23.38■■□□□ 1.33
RRP9-201ENST00000232888 TRIM39Q9HCM9 518 aa23.38■■□□□ 1.33
RRP9-201ENST00000232888 TCF7L2Q9NQB0 619 aa23.38■■□□□ 1.33
RRP9-201ENST00000232888 CDYLQ9Y232 598 aa23.38■■□□□ 1.33
RRP9-201ENST00000232888 STK38LQ9Y2H1 464 aa23.38■■□□□ 1.33
RRP9-201ENST00000232888 VEGFDO43915 354 aa23.37■■□□□ 1.33
RRP9-201ENST00000232888 ADAM23O75077 832 aa23.37■■□□□ 1.33
RRP9-201ENST00000232888 GPC4O75487 556 aa23.37■■□□□ 1.33
RRP9-201ENST00000232888 SLCO2B1O94956 709 aa23.37■■□□□ 1.33
RRP9-201ENST00000232888 DNTTP04053 509 aa23.37■■□□□ 1.33
RRP9-201ENST00000232888 CCR3P51677 355 aa23.37■■□□□ 1.33
RRP9-201ENST00000232888 HSPA14Q0VDF9 509 aa23.37■■□□□ 1.33
RRP9-201ENST00000232888 SMAD2Q15796 467 aaKnown RBP23.37■■□□□ 1.33
RRP9-201ENST00000232888 MAPK15Q8TD08 544 aa23.37■■□□□ 1.33
RRP9-201ENST00000232888 ELMO1Q92556 727 aa23.37■■□□□ 1.33
RRP9-201ENST00000232888 TRIM54Q9BYV2 358 aa23.37■■□□□ 1.33
RRP9-201ENST00000232888 SHCBP1LQ9BZQ2 653 aa23.37■■□□□ 1.33
RRP9-201ENST00000232888 SLC2A4RGQ9NR83 387 aa23.37■■□□□ 1.33
RRP9-201ENST00000232888 PTBP2Q9UKA9 531 aaKnown RBP23.37■■□□□ 1.33
RRP9-201ENST00000232888 PCTPQ9UKL6 214 aa23.37■■□□□ 1.33
RRP9-201ENST00000232888 A0A1W2PP55 124 aa23.36■■□□□ 1.33
RRP9-201ENST00000232888 A0A1W2PQF6 199 aa23.36■■□□□ 1.33
RRP9-201ENST00000232888 ANKRD65E5RJM6 399 aa23.36■■□□□ 1.33
RRP9-201ENST00000232888 UBFD1O14562 309 aaKnown RBP23.36■■□□□ 1.33
RRP9-201ENST00000232888 INPP4BO15327 924 aa23.36■■□□□ 1.33
RRP9-201ENST00000232888 RNASEH2AO75792 299 aaKnown RBP23.36■■□□□ 1.33
RRP9-201ENST00000232888 CDK14O94921 469 aa23.36■■□□□ 1.33
RRP9-201ENST00000232888 PCDH8O95206 1070 aa23.36■■□□□ 1.33
RRP9-201ENST00000232888 GTF2H3Q13889 308 aa23.36■■□□□ 1.33
RRP9-201ENST00000232888 SLC9B1Q4ZJI4 515 aa23.36■■□□□ 1.33
RRP9-201ENST00000232888 VWA5B1Q5TIE3 1220 aa23.36■■□□□ 1.33
RRP9-201ENST00000232888 KIAA1211LQ6NV74 962 aa23.36■■□□□ 1.33
RRP9-201ENST00000232888 OR56A4Q8NGH8 313 aa23.36■■□□□ 1.33
RRP9-201ENST00000232888 UBTD2Q8WUN7 234 aa23.36■■□□□ 1.33
RRP9-201ENST00000232888 NSL1Q96IY1 281 aa23.36■■□□□ 1.33
RRP9-201ENST00000232888 HIC2Q96JB3 615 aa23.36■■□□□ 1.33
RRP9-201ENST00000232888 MAELQ96JY0 434 aaKnown RBP23.36■■□□□ 1.33
RRP9-201ENST00000232888 SLC12A9Q9BXP2 914 aa23.36■■□□□ 1.33
RRP9-201ENST00000232888 MRGBPQ9NV56 204 aa23.36■■□□□ 1.33
RRP9-201ENST00000232888 MBD1Q9UIS9 605 aaPredicted RBP23.36■■□□□ 1.33
RRP9-201ENST00000232888 TNRC18O15417 2968 aaPredicted RBP23.36■■□□□ 1.33
RRP9-201ENST00000232888 NCF1BA6NI72 391 aaPredicted RBP23.35■■□□□ 1.33
RRP9-201ENST00000232888 NCF1CA8MVU1 366 aaPredicted RBP23.35■■□□□ 1.33
RRP9-201ENST00000232888 NCF1P14598 390 aaPredicted RBP23.35■■□□□ 1.33
RRP9-201ENST00000232888 INHBCP55103 352 aa23.35■■□□□ 1.33
RRP9-201ENST00000232888 NCALDP61601 193 aa23.35■■□□□ 1.33
RRP9-201ENST00000232888 SKIV2LQ15477 1246 aaKnown RBP23.35■■□□□ 1.33
RRP9-201ENST00000232888 TTC31Q49AM3 519 aaPredicted RBP23.35■■□□□ 1.33
RRP9-201ENST00000232888 EOGTQ5NDL2 527 aa23.35■■□□□ 1.33
RRP9-201ENST00000232888 KIAA1161Q6NSJ0 714 aa23.35■■□□□ 1.33
RRP9-201ENST00000232888 TMPRSS6Q8IU80 811 aa23.35■■□□□ 1.33
RRP9-201ENST00000232888 TCAIMQ8N3R3 496 aa23.35■■□□□ 1.33
RRP9-201ENST00000232888 CHCHD4Q8N4Q1 142 aa23.35■■□□□ 1.33
RRP9-201ENST00000232888 ASB11Q8WXH4 323 aa23.35■■□□□ 1.33
RRP9-201ENST00000232888 GLMNQ92990 594 aa23.35■■□□□ 1.33
RRP9-201ENST00000232888 HLA-CQ95604 372 aa23.35■■□□□ 1.33
RRP9-201ENST00000232888 NUF2Q9BZD4 464 aa23.35■■□□□ 1.33
RRP9-201ENST00000232888 MKRN2Q9H000 416 aaKnown RBP23.35■■□□□ 1.33
RRP9-201ENST00000232888 PARVBQ9HBI1 364 aa23.35■■□□□ 1.33
RRP9-201ENST00000232888 FBXL12Q9NXK8 326 aa23.35■■□□□ 1.33
RRP9-201ENST00000232888 UTP6Q9NYH9 597 aaKnown RBP23.35■■□□□ 1.33
RRP9-201ENST00000232888 ADAMTS6Q9UKP5 1117 aa23.35■■□□□ 1.33
RRP9-201ENST00000232888 GPR34Q9UPC5 381 aa23.35■■□□□ 1.33
RRP9-201ENST00000232888 CFAP73A6NFT4 308 aa23.35■■□□□ 1.33
RRP9-201ENST00000232888 IGLON5A6NGN9 336 aa23.35■■□□□ 1.33
RRP9-201ENST00000232888 OR2AG2A6NM03 316 aa23.35■■□□□ 1.33
RRP9-201ENST00000232888 CAPN14A8MX76 684 aa23.35■■□□□ 1.33
RRP9-201ENST00000232888 SOX1O00570 391 aaPredicted RBP23.35■■□□□ 1.33
RRP9-201ENST00000232888 PLRG1O43660 514 aaKnown RBP23.35■■□□□ 1.33
RRP9-201ENST00000232888 CDH13P55290 713 aa23.35■■□□□ 1.33
RRP9-201ENST00000232888 PKNOX1P55347 436 aa23.35■■□□□ 1.33
RRP9-201ENST00000232888 RPS21P63220 83 aaKnown RBP23.35■■□□□ 1.33
RRP9-201ENST00000232888 SH3BP2P78314 561 aa23.35■■□□□ 1.33
RRP9-201ENST00000232888 PLOD1Q02809 727 aaPredicted RBP23.35■■□□□ 1.33
RRP9-201ENST00000232888 CDC16Q13042 620 aa23.35■■□□□ 1.33
RRP9-201ENST00000232888 BOP1Q14137 746 aaKnown RBP23.35■■□□□ 1.33
RRP9-201ENST00000232888 PNCKQ6P2M8 343 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms