RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 MADCAM1Q13477 382 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 ERICH5Q6P6B1 374 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 CRYBG2Q8N1P7 616 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 CPXM1Q96SM3 734 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 MARCH7Q9H992 704 aa13.1□□□□□ -0.31
COL1A1-201ENST00000225964 A0A0U1RQJ8 604 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 BTNL10A8MVZ5 291 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 B4GALT4O60513 344 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 IPO13O94829 963 aaKnown RBP13.09□□□□□ -0.31
COL1A1-201ENST00000225964 IGFBP5P24593 272 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 GALK1P51570 392 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 BMT2Q1RMZ1 405 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 CLEC6AQ6EIG7 209 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 C15orf52Q6ZUT6 534 aaKnown RBP13.09□□□□□ -0.31
COL1A1-201ENST00000225964 GPR65Q8IYL9 337 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 FAM110BQ8TC76 370 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 HOPXQ9BPY8 73 aaPredicted RBP13.09□□□□□ -0.31
COL1A1-201ENST00000225964 ARHGAP9Q9BRR9 750 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 RTKNQ9BST9 563 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 OSBPL11Q9BXB4 747 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 MSX2P35548 267 aaPredicted RBP13.09□□□□□ -0.31
COL1A1-201ENST00000225964 LNX2Q8N448 690 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 SFRP1Q8N474 314 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 SCLYQ96I15 445 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 SLC17A7Q9P2U7 560 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 LOC110117498-PIK3R3F6TDL0 507 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 SAP18O00422 153 aaKnown RBP13.09□□□□□ -0.31
COL1A1-201ENST00000225964 CCL22O00626 93 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 ZBTB48P10074 688 aaPredicted RBP13.09□□□□□ -0.31
COL1A1-201ENST00000225964 ZNF8P17098 575 aaPredicted RBP13.09□□□□□ -0.31
COL1A1-201ENST00000225964 CYP3A5P20815 502 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 CCNCP24863 283 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 YAP1P46937 504 aaKnown RBP13.09□□□□□ -0.31
COL1A1-201ENST00000225964 NRG3P56975 720 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 SEMG2Q02383 582 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 UBAP2Q5T6F2 1119 aaKnown RBP13.09□□□□□ -0.31
COL1A1-201ENST00000225964 TMEM164Q5U3C3 297 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 GLYATQ6IB77 296 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 LCLAT1Q6UWP7 414 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 SLC26A9Q7LBE3 791 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 NKIRAS2Q9NYR9 191 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 TMA7Q9Y2S6 64 aaKnown RBP13.09□□□□□ -0.31
COL1A1-201ENST00000225964 NRP2O60462 931 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 PAPSS2O95340 614 aaPredicted RBP13.09□□□□□ -0.31
COL1A1-201ENST00000225964 TNFRSF8P28908 595 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 GDI1P31150 447 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 RTP1P59025 263 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 SP140Q13342 867 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 NOMO1Q15155 1222 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 GSDMCQ9BYG8 508 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 PCBD2Q9H0N5 130 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 CCNB1IP1Q9NPC3 277 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 POLR3BQ9NW08 1133 aaPredicted RBP13.09□□□□□ -0.31
COL1A1-201ENST00000225964 FADS2P1A8MWK0 482 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 CILPO75339 1184 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 PGM3O95394 542 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 VLDLRP98155 873 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 LIPEQ05469 1076 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 PUM1Q14671 1186 aaKnown RBP eCLIP13.09□□□□□ -0.31
COL1A1-201ENST00000225964 SPRYD7Q5W111 196 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 REP15Q6BDI9 236 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 ZBTB46Q86UZ6 589 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 DCBLD1Q8N8Z6 715 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 PRELID2Q8N945 189 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 EIF1ADQ8N9N8 165 aaKnown RBP13.09□□□□□ -0.31
COL1A1-201ENST00000225964 DQX1Q8TE96 717 aaKnown RBP13.09□□□□□ -0.31
COL1A1-201ENST00000225964 WDR60Q8WVS4 1066 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 SLC35G5Q96KT7 338 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 CST11Q9H112 138 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 LRMDAQ9H2I8 198 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 LDAHQ9H6V9 325 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 PNPLA3Q9NST1 481 aa13.09□□□□□ -0.31
COL1A1-201ENST00000225964 CSKP41240 450 aa13.08□□□□□ -0.31
COL1A1-201ENST00000225964 CHIT1Q13231 466 aa13.08□□□□□ -0.31
COL1A1-201ENST00000225964 VPS26BQ4G0F5 336 aa13.08□□□□□ -0.31
COL1A1-201ENST00000225964 S100ZQ8WXG8 99 aa13.08□□□□□ -0.31
COL1A1-201ENST00000225964 TBATAQ96M53 351 aa13.08□□□□□ -0.31
COL1A1-201ENST00000225964 OSBPL2Q9H1P3 480 aa13.08□□□□□ -0.31
COL1A1-201ENST00000225964 TRIM39Q9HCM9 518 aa13.08□□□□□ -0.31
COL1A1-201ENST00000225964 CHRAC1Q9NRG0 131 aa13.08□□□□□ -0.31
COL1A1-201ENST00000225964 TBC1D24Q9ULP9 559 aa13.08□□□□□ -0.31
COL1A1-201ENST00000225964 C9J4A7 227 aa13.08□□□□□ -0.32
COL1A1-201ENST00000225964 DDX3YO15523 660 aaKnown RBP13.08□□□□□ -0.32
COL1A1-201ENST00000225964 OGNP20774 298 aaKnown RBP13.08□□□□□ -0.32
COL1A1-201ENST00000225964 TTKP33981 857 aa13.08□□□□□ -0.32
COL1A1-201ENST00000225964 KHKP50053 298 aa13.08□□□□□ -0.32
COL1A1-201ENST00000225964 C5orf22Q49AR2 442 aa13.08□□□□□ -0.32
COL1A1-201ENST00000225964 LCN1P1Q5VSP4 162 aa13.08□□□□□ -0.32
COL1A1-201ENST00000225964 GHDCQ8N2G8 530 aa13.08□□□□□ -0.32
COL1A1-201ENST00000225964 SPATA22Q8NHS9 363 aa13.08□□□□□ -0.32
COL1A1-201ENST00000225964 ACBD6Q9BR61 282 aa13.08□□□□□ -0.32
COL1A1-201ENST00000225964 TRIM2Q9C040 744 aa13.08□□□□□ -0.32
COL1A1-201ENST00000225964 S100A9P06702 114 aaKnown RBP13.08□□□□□ -0.32
COL1A1-201ENST00000225964 PLA2G16P53816 162 aa13.08□□□□□ -0.32
COL1A1-201ENST00000225964 ARSIQ5FYB1 569 aa13.08□□□□□ -0.32
COL1A1-201ENST00000225964 IL23RQ5VWK5 629 aa13.08□□□□□ -0.32
COL1A1-201ENST00000225964 ABHD13Q7L211 337 aa13.08□□□□□ -0.32
COL1A1-201ENST00000225964 SETD7Q8WTS6 366 aaKnown RBP13.08□□□□□ -0.32
COL1A1-201ENST00000225964 OR2AG1Q9H205 316 aa13.08□□□□□ -0.32
COL1A1-201ENST00000225964 SNX7Q9UNH6 387 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms