RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 TMEM131Q92545 1883 aa26.77■■□□□ 1.88
CHMP4B-201ENST00000217402 PIKFYVEQ9Y2I7 2098 aa26.77■■□□□ 1.88
CHMP4B-201ENST00000217402 LAMA1P25391 3075 aa26.77■■□□□ 1.88
CHMP4B-201ENST00000217402 HMX2A2RU54 273 aa26.77■■□□□ 1.88
CHMP4B-201ENST00000217402 MGAT4DA6NG13 374 aa26.77■■□□□ 1.88
CHMP4B-201ENST00000217402 RASGRF2O14827 1237 aa26.77■■□□□ 1.88
CHMP4B-201ENST00000217402 KRT38O76015 456 aa26.77■■□□□ 1.88
CHMP4B-201ENST00000217402 TAS2R39P59534 338 aa26.77■■□□□ 1.88
CHMP4B-201ENST00000217402 ARHGAP8P85298 464 aa26.77■■□□□ 1.88
CHMP4B-201ENST00000217402 ILF3Q12906 894 aaKnown RBP eCLIP26.77■■□□□ 1.88
CHMP4B-201ENST00000217402 LRP8Q14114 963 aa26.77■■□□□ 1.88
CHMP4B-201ENST00000217402 USP10Q14694 798 aaKnown RBP26.77■■□□□ 1.88
CHMP4B-201ENST00000217402 SF3A2Q15428 464 aaKnown RBP26.77■■□□□ 1.88
CHMP4B-201ENST00000217402 ZNF423Q2M1K9 1284 aa26.77■■□□□ 1.88
CHMP4B-201ENST00000217402 OTOAQ7RTW8 1153 aa26.77■■□□□ 1.88
CHMP4B-201ENST00000217402 LILRA3Q8N6C8 439 aaPredicted RBP26.77■■□□□ 1.88
CHMP4B-201ENST00000217402 OR2L2Q8NH16 312 aa26.77■■□□□ 1.88
CHMP4B-201ENST00000217402 LMX1AQ8TE12 382 aa26.77■■□□□ 1.88
CHMP4B-201ENST00000217402 ZDHHC5Q9C0B5 715 aa26.77■■□□□ 1.88
CHMP4B-201ENST00000217402 PPCSQ9HAB8 311 aa26.77■■□□□ 1.88
CHMP4B-201ENST00000217402 SPATS2LQ9NUQ6 558 aaKnown RBP26.77■■□□□ 1.88
CHMP4B-201ENST00000217402 TAS2R13Q9NYV9 303 aa26.77■■□□□ 1.88
CHMP4B-201ENST00000217402 RAPGEFL1Q9UHV5 662 aa26.77■■□□□ 1.88
CHMP4B-201ENST00000217402 DNMT3AQ9Y6K1 912 aaPredicted RBP26.77■■□□□ 1.88
CHMP4B-201ENST00000217402 ADAMTS9Q9P2N4 1935 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 TCEA3O75764 348 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 VCLP18206 1134 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 FDXRP22570 491 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 SLC12A2P55011 1212 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 TIAL1Q01085 375 aaKnown RBP eCLIP26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 ZNF844Q08AG5 666 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 ILF2Q12905 390 aaKnown RBP26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 ZNF460Q14592 562 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 TMED2Q15363 201 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 SYTL3Q4VX76 610 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 SLC30A9Q6PML9 568 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 FAM83HQ6ZRV2 1179 aaPredicted RBP26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 CFAP206Q8IYR0 622 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 ZNF548Q8NEK5 533 aaPredicted RBP26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 GIMAP7Q8NHV1 300 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 HM13Q8TCT9 377 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 SLC30A3Q99726 388 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 LNP1A1A4G5 178 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 CER1O95813 267 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 ACTR1BP42025 376 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 CLCN7P51798 805 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 ACTR1AP61163 376 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 POU4F1Q01851 419 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 SHBQ15464 509 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 CMC1Q7Z7K0 106 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 CEP97Q8IW35 865 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 PHOX2BQ99453 314 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 SPASTQ9UBP0 616 aa26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 TRMT6Q9UJA5 497 aaKnown RBP26.76■■□□□ 1.87
CHMP4B-201ENST00000217402 TRIM49D1C9J1S8 452 aa26.75■■□□□ 1.87
CHMP4B-201ENST00000217402 CDH16O75309 829 aa26.75■■□□□ 1.87
CHMP4B-201ENST00000217402 PIAS2O75928 621 aa26.75■■□□□ 1.87
CHMP4B-201ENST00000217402 KRT37O76014 449 aa26.75■■□□□ 1.87
CHMP4B-201ENST00000217402 ZNF806P0C7X5 589 aa26.75■■□□□ 1.87
CHMP4B-201ENST00000217402 AOAHP28039 575 aa26.75■■□□□ 1.87
CHMP4B-201ENST00000217402 PREPP48147 710 aa26.75■■□□□ 1.87
CHMP4B-201ENST00000217402 HSPA14Q0VDF9 509 aa26.75■■□□□ 1.87
CHMP4B-201ENST00000217402 PDAP1Q13442 181 aaKnown RBP26.75■■□□□ 1.87
CHMP4B-201ENST00000217402 TAF8Q7Z7C8 310 aa26.75■■□□□ 1.87
CHMP4B-201ENST00000217402 NRROSQ86YC3 692 aa26.75■■□□□ 1.87
CHMP4B-201ENST00000217402 TDRPQ86YL5 185 aa26.75■■□□□ 1.87
CHMP4B-201ENST00000217402 ZBTB2Q8N680 514 aa26.75■■□□□ 1.87
CHMP4B-201ENST00000217402 CD200R1Q8TD46 325 aa26.75■■□□□ 1.87
CHMP4B-201ENST00000217402 GSDMCQ9BYG8 508 aa26.75■■□□□ 1.87
CHMP4B-201ENST00000217402 COG4Q9H9E3 785 aa26.75■■□□□ 1.87
CHMP4B-201ENST00000217402 UCKL1Q9NWZ5 548 aa26.75■■□□□ 1.87
CHMP4B-201ENST00000217402 TSR3Q9UJK0 312 aaKnown RBP26.75■■□□□ 1.87
CHMP4B-201ENST00000217402 A0A1B0GTQ1 180 aa26.74■■□□□ 1.87
CHMP4B-201ENST00000217402 C17orf113A0A1B0GUU1 675 aa26.74■■□□□ 1.87
CHMP4B-201ENST00000217402 AQP9O43315 295 aa26.74■■□□□ 1.87
CHMP4B-201ENST00000217402 CNTFP26441 200 aa26.74■■□□□ 1.87
CHMP4B-201ENST00000217402 RXRGP48443 463 aa26.74■■□□□ 1.87
CHMP4B-201ENST00000217402 ATXN3P54252 364 aaPredicted RBP26.74■■□□□ 1.87
CHMP4B-201ENST00000217402 BNIP3Q12983 259 aa26.74■■□□□ 1.87
CHMP4B-201ENST00000217402 ELOCQ15369 112 aa26.74■■□□□ 1.87
CHMP4B-201ENST00000217402 SEPT7Q16181 437 aaKnown RBP26.74■■□□□ 1.87
CHMP4B-201ENST00000217402 KRT71Q3SY84 523 aa26.74■■□□□ 1.87
CHMP4B-201ENST00000217402 ZNF658BQ4V348 819 aaPredicted RBP26.74■■□□□ 1.87
CHMP4B-201ENST00000217402 CEP85LQ5SZL2 805 aa26.74■■□□□ 1.87
CHMP4B-201ENST00000217402 LGSNQ5TDP6 509 aa26.74■■□□□ 1.87
CHMP4B-201ENST00000217402 XKR5Q6UX68 686 aa26.74■■□□□ 1.87
CHMP4B-201ENST00000217402 HDXQ7Z353 690 aa26.74■■□□□ 1.87
CHMP4B-201ENST00000217402 GPBAR1Q8TDU6 330 aa26.74■■□□□ 1.87
CHMP4B-201ENST00000217402 ROPN1BQ9BZX4 212 aaPredicted RBP26.74■■□□□ 1.87
CHMP4B-201ENST00000217402 ROPN1Q9HAT0 212 aaPredicted RBP26.74■■□□□ 1.87
CHMP4B-201ENST00000217402 SEMA4GQ9NTN9 838 aa26.74■■□□□ 1.87
CHMP4B-201ENST00000217402 IQANK1A0A1B0GTG1 560 aa26.73■■□□□ 1.87
CHMP4B-201ENST00000217402 PHGDHO43175 533 aaKnown RBP26.73■■□□□ 1.87
CHMP4B-201ENST00000217402 SNX2O60749 519 aa26.73■■□□□ 1.87
CHMP4B-201ENST00000217402 APOA4P06727 396 aa26.73■■□□□ 1.87
CHMP4B-201ENST00000217402 SNRPAP09012 282 aaKnown RBP26.73■■□□□ 1.87
CHMP4B-201ENST00000217402 GSTM1P09488 218 aa26.73■■□□□ 1.87
CHMP4B-201ENST00000217402 EPHA8P29322 1005 aaPredicted RBP26.73■■□□□ 1.87
CHMP4B-201ENST00000217402 NHLH1Q02575 133 aa26.73■■□□□ 1.87
CHMP4B-201ENST00000217402 GSTM4Q03013 218 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms