RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 NKG7Q16617 165 aa16.54■□□□□ 0.24
CTDP1-201ENST00000075430 MRNIPQ6NTE8 343 aa16.54■□□□□ 0.24
CTDP1-201ENST00000075430 NTAN1Q96AB6 310 aa16.54■□□□□ 0.24
CTDP1-201ENST00000075430 REXO4Q9GZR2 422 aaKnown RBP16.54■□□□□ 0.24
CTDP1-201ENST00000075430 NMUR1Q9HB89 426 aa16.54■□□□□ 0.24
CTDP1-201ENST00000075430 SDR39U1Q9NRG7 319 aaPredicted RBP16.54■□□□□ 0.24
CTDP1-201ENST00000075430 DOCK1Q14185 1865 aa16.54■□□□□ 0.24
CTDP1-201ENST00000075430 GPR32O75388 356 aa16.54■□□□□ 0.24
CTDP1-201ENST00000075430 DNTTP04053 509 aa16.54■□□□□ 0.24
CTDP1-201ENST00000075430 PFKLP17858 780 aa16.54■□□□□ 0.24
CTDP1-201ENST00000075430 ALDH3A2P51648 485 aa16.54■□□□□ 0.24
CTDP1-201ENST00000075430 RAPSNQ13702 412 aa16.54■□□□□ 0.24
CTDP1-201ENST00000075430 ZNF846Q147U1 533 aa16.54■□□□□ 0.24
CTDP1-201ENST00000075430 C6orf136Q5SQH8 315 aa16.54■□□□□ 0.24
CTDP1-201ENST00000075430 SPRED1Q7Z699 444 aa16.54■□□□□ 0.24
CTDP1-201ENST00000075430 SLC35B4Q969S0 331 aa16.54■□□□□ 0.24
CTDP1-201ENST00000075430 SMARCD1Q96GM5 515 aa16.54■□□□□ 0.24
CTDP1-201ENST00000075430 MAGED4Q96JG8 741 aa16.54■□□□□ 0.24
CTDP1-201ENST00000075430 BARD1Q99728 777 aaKnown RBP16.54■□□□□ 0.24
CTDP1-201ENST00000075430 TDRD1Q9BXT4 1180 aaKnown RBP16.54■□□□□ 0.24
CTDP1-201ENST00000075430 CATSPERZQ9NTU4 200 aa16.54■□□□□ 0.24
CTDP1-201ENST00000075430 COMMD8Q9NX08 183 aa16.54■□□□□ 0.24
CTDP1-201ENST00000075430 ST3GAL5Q9UNP4 418 aa16.54■□□□□ 0.24
CTDP1-201ENST00000075430 PRG3Q9Y2Y8 225 aaPredicted RBP16.54■□□□□ 0.24
CTDP1-201ENST00000075430 LEPRP48357 1165 aaKnown RBP16.53■□□□□ 0.24
CTDP1-201ENST00000075430 TMEM179BQ7Z7N9 219 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 LRRTM3Q86VH5 581 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 UBE2J2Q8N2K1 259 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 EEF1AKMT1Q8WVE0 214 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 PPP1R14BQ96C90 147 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 SLC47A1Q96FL8 570 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 BBS2Q9BXC9 721 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 IKZF5Q9H5V7 419 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 ATP13A3Q9H7F0 1226 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 SARDHQ9UL12 918 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 GPR45Q9Y5Y3 372 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 HS3ST4Q9Y661 456 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 BBIP1A8MTZ0 92 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 PABPC1P11940 636 aaKnown RBP16.53■□□□□ 0.24
CTDP1-201ENST00000075430 BMP4P12644 408 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 RFTN2Q52LD8 501 aaPredicted RBP16.53■□□□□ 0.24
CTDP1-201ENST00000075430 PACRGLQ8N7B6 248 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 CHDHQ8NE62 594 aaPredicted RBP16.53■□□□□ 0.24
CTDP1-201ENST00000075430 STAG3L4Q8TBR4 150 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 RSPH1Q8WYR4 309 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 PRKD2Q9BZL6 878 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 FARSBQ9NSD9 589 aaKnown RBP16.53■□□□□ 0.24
CTDP1-201ENST00000075430 BOLA1Q9Y3E2 137 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 PCDHGC4Q9Y5F7 938 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 LCKP06239 509 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 EPHA2P29317 976 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 GRK4P32298 578 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 THPOP40225 353 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 NUDT6P53370 316 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 NPTX1Q15818 432 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 ANGPTL8Q6UXH0 198 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 Q6ZPB1 254 aaPredicted RBP16.53■□□□□ 0.24
CTDP1-201ENST00000075430 OR4L1Q8NH43 312 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 LINGO1Q96FE5 620 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 SMOC2Q9H3U7 446 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.53■□□□□ 0.24
CTDP1-201ENST00000075430 SLCO3A1Q9UIG8 710 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 ANK1P16157 1881 aa16.53■□□□□ 0.24
CTDP1-201ENST00000075430 NBNO60934 754 aa16.52■□□□□ 0.24
CTDP1-201ENST00000075430 INHBBP09529 407 aa16.52■□□□□ 0.24
CTDP1-201ENST00000075430 RENBPP51606 427 aa16.52■□□□□ 0.24
CTDP1-201ENST00000075430 ADARB1P78563 741 aaKnown RBP16.52■□□□□ 0.24
CTDP1-201ENST00000075430 RAD51Q06609 339 aa16.52■□□□□ 0.24
CTDP1-201ENST00000075430 DPY19L1Q2PZI1 675 aa16.52■□□□□ 0.24
CTDP1-201ENST00000075430 ADPRMQ3LIE5 342 aa16.52■□□□□ 0.24
CTDP1-201ENST00000075430 SCML4Q8N228 414 aa16.52■□□□□ 0.24
CTDP1-201ENST00000075430 POLR3BQ9NW08 1133 aaPredicted RBP16.52■□□□□ 0.24
CTDP1-201ENST00000075430 CDH7Q9ULB5 785 aa16.52■□□□□ 0.24
CTDP1-201ENST00000075430 FAM32AQ9Y421 112 aaKnown RBP16.52■□□□□ 0.24
CTDP1-201ENST00000075430 TNPO2O14787 897 aaKnown RBP16.52■□□□□ 0.23
CTDP1-201ENST00000075430 FAM20BO75063 409 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 STAU1O95793 577 aaKnown RBP16.52■□□□□ 0.23
CTDP1-201ENST00000075430 CAPNS1P04632 268 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 CHRM5P08912 532 aaPredicted RBP16.52■□□□□ 0.23
CTDP1-201ENST00000075430 OR1E1P30953 314 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 HUNKP57058 714 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 EMX1Q04741 257 aaPredicted RBP16.52■□□□□ 0.23
CTDP1-201ENST00000075430 RSBN1Q5VWQ0 802 aaPredicted RBP16.52■□□□□ 0.23
CTDP1-201ENST00000075430 LRRC8DQ7L1W4 858 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 TMEM199Q8N511 208 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 C2orf69Q8N8R5 385 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 PROKR1Q8TCW9 393 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 ZNF347Q96SE7 839 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 SLC9A7Q96T83 725 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 PARK7Q99497 189 aaKnown RBP16.52■□□□□ 0.23
CTDP1-201ENST00000075430 CGREF1Q99674 301 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 LRRC3Q9BY71 257 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 RNF167Q9H6Y7 350 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 PAK1IP1Q9NWT1 392 aaPredicted RBP16.52■□□□□ 0.23
CTDP1-201ENST00000075430 LOC100130705A0A1B0GUX0 176 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 ALPLP05186 524 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 ITGB1P05556 798 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 HTR1AP08908 422 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 HSPA7P48741 367 aa16.52■□□□□ 0.23
CTDP1-201ENST00000075430 COPZ1P61923 177 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms