RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 A0A1W2PPW3 197 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 SYCE1LA8MT33 242 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 BOLA2-SMG1P6H3BVE0 249 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 PITPNM1O00562 1244 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 DLGAP1O14490 977 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 COQ9O75208 318 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 PRAMEF1O95521 474 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 CKMP06732 381 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 PSMA4P25789 261 aaKnown RBP12.95□□□□□ -0.34
CTNS-201ENST00000046640 HTR6P50406 440 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 ATP6V0D1P61421 351 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 TLE2Q04725 743 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 TIGD2Q4W5G0 525 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 PAGE3Q5JUK9 113 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 BORAQ6PGQ7 559 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 NKAPQ8N5F7 415 aaKnown RBP12.95□□□□□ -0.34
CTNS-201ENST00000046640 FNDC5Q8NAU1 212 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 ADAMTS19Q8TE59 1207 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 MYLIPQ8WY64 445 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 POLR1BQ9H9Y6 1135 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 POPDC3Q9HBV1 291 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 DOLKQ9UPQ8 538 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 PRSS21Q9Y6M0 314 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 UNC80Q8N2C7 3258 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 ABLIM3O94929 683 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 CYBBP04839 570 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 PCNAP12004 261 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 CD247P20963 164 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 FASP25445 335 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 SGO1Q5FBB7 561 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 SLAIN1Q8ND83 568 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 RNF208Q9H0X6 261 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 NSUN3Q9H649 340 aaKnown RBP12.95□□□□□ -0.34
CTNS-201ENST00000046640 ASB8Q9H765 288 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 CXorf21Q9HAI6 301 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 IL17CQ9P0M4 197 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 PADI4Q9UM07 663 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 FFAR3O14843 346 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 ARPC2O15144 300 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 GPR42O15529 346 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 SNAP29O95721 258 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 RPS17P08708 135 aaKnown RBP12.95□□□□□ -0.34
CTNS-201ENST00000046640 HOXB8P17481 243 aaPredicted RBP12.95□□□□□ -0.34
CTNS-201ENST00000046640 NR4A1P22736 598 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 MAGEA8P43361 318 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 ERVPABLB-1P60509 514 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 NFYCQ13952 458 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 TRIM60Q495X7 471 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 FGD3Q5JSP0 725 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 ARMC12Q5T9G4 340 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 LETMD1Q6P1Q0 360 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 CHST9Q7L1S5 443 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 SERPINA9Q86WD7 417 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 HS6ST3Q8IZP7 471 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 METTL6Q8TCB7 284 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 BACE2Q9Y5Z0 518 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 GMEB1Q9Y692 573 aa12.95□□□□□ -0.34
CTNS-201ENST00000046640 A0A087WXM4 84 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 FXYD1O00168 92 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 E2F3O00716 465 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 SYNCRIPO60506 623 aaKnown RBP12.94□□□□□ -0.34
CTNS-201ENST00000046640 ESRRBO95718 433 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 CAPN1P07384 714 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 GABRR2P28476 465 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 GGT5P36269 586 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 HSPA7P48741 367 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 ACADVLP49748 655 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 STK19P49842 368 aaPredicted RBP12.94□□□□□ -0.34
CTNS-201ENST00000046640 CCR3P51677 355 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 CLCN2P51788 898 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 DEFB103AP81534 67 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 INPP5AQ14642 412 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 IL27RAQ6UWB1 636 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 GPRIN3Q6ZVF9 776 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 TSPAN33Q86UF1 283 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 RALGPS2Q86X27 583 aaPredicted RBP12.94□□□□□ -0.34
CTNS-201ENST00000046640 ANKFN1Q8N957 763 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 STON2Q8WXE9 905 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 LRRC58Q96CX6 371 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 MYO19Q96H55 970 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 ASB2Q96Q27 587 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 SDR39U1Q9NRG7 319 aaPredicted RBP12.94□□□□□ -0.34
CTNS-201ENST00000046640 CCM2LQ9NUG4 571 aaPredicted RBP12.94□□□□□ -0.34
CTNS-201ENST00000046640 SARDHQ9UL12 918 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 FADS3Q9Y5Q0 445 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 MAGED1Q9Y5V3 778 aaPredicted RBP12.94□□□□□ -0.34
CTNS-201ENST00000046640 SOD2P04179 222 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 SLC6A2P23975 617 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 CTSOP43234 321 aaPredicted RBP12.94□□□□□ -0.34
CTNS-201ENST00000046640 CLCN7P51798 805 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 NAA20P61599 178 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 BNIP3Q12983 259 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 MBOAT1Q6ZNC8 495 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 BBS7Q8IWZ6 715 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 GIPC3Q8TF64 312 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 HHIPL1Q96JK4 782 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 OSBPL6Q9BZF3 934 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 GPR45Q9Y5Y3 372 aa12.94□□□□□ -0.34
CTNS-201ENST00000046640 CHD5Q8TDI0 1954 aa12.93□□□□□ -0.34
CTNS-201ENST00000046640 TYW5A2RUC4 315 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms