RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 PRAMEF12O95522 483 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 ANXA5P08758 320 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 SLC35E2BP0CK96 405 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 COX7A2P14406 83 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 SOX9P48436 509 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 HSPA13P48723 471 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 RAP1GDS1P52306 607 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 PRKAG1P54619 331 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 SLC8B1Q6J4K2 584 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 USP45Q70EL2 814 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 PGAM4Q8N0Y7 254 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 CSGALNACT1Q8TDX6 532 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 OR52E6Q96RD3 313 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 COPS8Q99627 209 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 UPK3BL1B0FP48 263 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 UPK3BL2E5RIL1 263 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 ELFN1P0C7U0 828 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 DIO3P55073 304 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 GPNMBQ14956 572 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 RABL3Q5HYI8 236 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 SERPINA9Q86WD7 417 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 ZNF614Q8N883 585 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 CHST14Q8NCH0 376 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 PLD4Q96BZ4 506 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 TRAPPC9Q96Q05 1148 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 OLFM1Q99784 485 aa11.91□□□□□ -0.5
CHPF2-201ENST00000035307 STN1Q9H668 368 aaKnown RBP11.91□□□□□ -0.5
CHPF2-201ENST00000035307 CFAP20Q9Y6A4 193 aaKnown RBP11.91□□□□□ -0.5
CHPF2-201ENST00000035307 ASXL3Q9C0F0 2248 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 TPRP12270 2363 aaKnown RBP11.9□□□□□ -0.5
CHPF2-201ENST00000035307 TRAFD1O14545 582 aaPredicted RBP11.9□□□□□ -0.5
CHPF2-201ENST00000035307 OR56A5P0C7T3 313 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 DGKAP23743 735 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 CYP4F2P78329 520 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 LIPEQ05469 1076 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 PLEKHG6Q3KR16 790 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 TMEM240Q5SV17 173 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 ANKRD33Q7Z3H0 272 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 TSPAN33Q86UF1 283 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 SOX17Q9H6I2 414 aaPredicted RBP11.9□□□□□ -0.5
CHPF2-201ENST00000035307 PRDM16Q9HAZ2 1276 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 STK39Q9UEW8 545 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 DPP7Q9UHL4 492 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 PADI4Q9UM07 663 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 PRPF19Q9UMS4 504 aaKnown RBP11.9□□□□□ -0.5
CHPF2-201ENST00000035307 JUNP05412 331 aaKnown RBP11.9□□□□□ -0.5
CHPF2-201ENST00000035307 CEBPBP17676 345 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 CCNFP41002 786 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 MAPKAPK2P49137 400 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 INPP1P49441 399 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 SLC18A1P54219 525 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 CAMK2GQ13555 558 aaPredicted RBP11.9□□□□□ -0.5
CHPF2-201ENST00000035307 TCEAL5Q5H9L2 206 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 LDLRAP1Q5SW96 308 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 FAM219BQ5XKK7 198 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 CMTR2Q8IYT2 770 aaKnown RBP11.9□□□□□ -0.5
CHPF2-201ENST00000035307 CPSF7Q8N684 471 aaKnown RBP11.9□□□□□ -0.5
CHPF2-201ENST00000035307 DEFB119Q8N690 84 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 MAGEC3Q8TD91 643 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 EEF1AKMT1Q8WVE0 214 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 PKP2Q99959 881 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 TMEM248Q9NWD8 314 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 LEF1Q9UJU2 399 aaPredicted RBP11.9□□□□□ -0.5
CHPF2-201ENST00000035307 ZNF490Q9ULM2 529 aaPredicted RBP11.9□□□□□ -0.5
CHPF2-201ENST00000035307 ITM2BQ9Y287 266 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 HTTP42858 3142 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 TBC1D3DA0A087WVF3 549 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 TBC1D3IA0A087WXS9 549 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 TBC1D3EA0A087X179 549 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 TBC1D3KA0A087X1G2 549 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 TBC1D3FA6NER0 549 aaPredicted RBP11.9□□□□□ -0.5
CHPF2-201ENST00000035307 C16orf96A6NNT2 1141 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 TTC34A8MYJ7 566 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 TBC1D3LB9A6J9 549 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 PPP6CO00743 305 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 RGS14O43566 566 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 TBC1D3HP0C7X1 549 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 FSHRP23945 695 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 MADCAM1Q13477 382 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 TMEM31Q5JXX7 168 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 TBC1D3GQ6DHY5 549 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 TBC1D3CQ6IPX1 549 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 ZCCHC8Q6NZY4 707 aaKnown RBP11.9□□□□□ -0.5
CHPF2-201ENST00000035307 Q6ZVL8 140 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 LRRC49Q8IUZ0 686 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 PHACTR4Q8IZ21 702 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 TBC1D3Q8IZP1 549 aaPredicted RBP11.9□□□□□ -0.5
CHPF2-201ENST00000035307 BRSK1Q8TDC3 778 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 C2orf15Q8WU43 125 aaKnown RBP11.9□□□□□ -0.5
CHPF2-201ENST00000035307 STYXQ8WUJ0 223 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 MIEF1Q9NQG6 463 aa11.9□□□□□ -0.5
CHPF2-201ENST00000035307 CACNA1EQ15878 2313 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 PRAMEF11O60813 436 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 OAS1P00973 400 aaKnown RBP11.89□□□□□ -0.51
CHPF2-201ENST00000035307 KCNA5P22460 613 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 GPR1P46091 355 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 NEK2P51955 445 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 CYP4F3Q08477 520 aa11.89□□□□□ -0.51
CHPF2-201ENST00000035307 SIM2Q14190 667 aaPredicted RBP11.89□□□□□ -0.51
CHPF2-201ENST00000035307 ACAP2Q15057 778 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms