RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Rplp2P99027 115 aaKnown RBP13.08□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Patl1Q3TC46 770 aaKnown RBP13.08□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 PkdccQ5RJI4 492 aa13.08□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Lcp2Q60787 533 aaKnown RBP13.08□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Fam163bQ8BUM6 167 aa13.08□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Bmt2Q8BXK4 403 aa13.08□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Tbc1d17Q8BYH7 645 aa13.08□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Gramd1aQ8VEF1 722 aa13.08□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Olfr342Q8VGK7 312 aa13.08□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Rnh1Q91VI7 456 aa13.08□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Dio3Q91ZI8 304 aa13.08□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Glod5Q9D8I3 148 aa13.08□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Akr1e2Q9DCT1 301 aa13.08□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Sae1Q9R1T2 350 aa13.08□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 Epb41l1Q9Z2H5 879 aa13.08□□□□□ -0.31
Pdgfra-205ENSMUST00000201711 SisF8VQM5 1818 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Togaram1Q6A070 1776 aaKnown RBP13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Ankrd16A2AS55 361 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Gm6337K7N6X9 211 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Gm3115L7N285 211 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Pxmp2P42925 194 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Hoxd13P70217 339 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Bop1P97452 732 aaKnown RBP13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 UcmaQ14BU0 138 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Q3U7U4 132 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Olfr301Q7TS04 311 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 ZfatQ7TS63 1237 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Ppp1r15bQ8BFW3 697 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Sec22cQ8BXT9 303 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 SynpoQ8CC35 929 aaKnown RBP13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Pcdhb17Q91VD8 799 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Atp6v1g1Q9CR51 118 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Ubqln5Q9D4I8 510 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Slc4a5E9Q3M5 1116 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 TfamP40630 243 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 SqleP52019 572 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Rpl26P61255 145 aaKnown RBP13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Fpr-rs6Q3SXG2 339 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Pdap1Q3UHX2 181 aaKnown RBP13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Q3UY34 256 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Klhl5Q6PFE1 708 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Rslcan18Q7M6X5 460 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Scn4bQ7M729 228 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 ToporsQ80Z37 1033 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Mief1Q8BGV8 463 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Hspa13Q8BM72 471 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 BicralQ8CHH5 1074 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Slco4a1Q8K078 723 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Olfr866Q8VFI7 312 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Olfr606Q8VGZ8 319 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Klk6Q91Y82 253 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Cmtm7Q9ESD6 167 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Akr1a1Q9JII6 325 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Tdp2Q9JJX7 370 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Il20Q9JKV9 176 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Robo3Q9Z2I4 1366 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 1600015I10RikE9Q745 711 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Fignl2J3QK54 644 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 F3P20352 294 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Lsm3P62311 102 aaKnown RBP13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 CtscP97821 462 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Gpr174Q3U507 335 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Hdgfl2Q3UMU9 669 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Kcna4Q61423 654 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Pou4f2Q63934 411 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 CilpQ66K08 1184 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Inppl1Q6P549 1257 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Dnajc15Q78YY6 149 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 R3hcc1lQ8BJM3 775 aaKnown RBP13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Fuca1Q99LJ1 452 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Tex22Q9D9U4 189 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Nrip2Q9JHR9 270 aa13.08□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Tmem236A2ARJ3 344 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Zyg11aA2BFL2 627 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Olfr742A2RTP5 311 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Vmn1r238E9Q373 306 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Fbxw9F8VPX2 458 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 AldoaP05064 364 aaKnown RBP13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 GhrP16882 650 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Ufm1P61961 85 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 IhhP97812 411 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Esrp1Q3US41 680 aaKnown RBP13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Tead4Q62296 427 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Hist2h2acQ64523 129 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Hist2h2aa1Q6GSS7 130 aaKnown RBP13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Olfr293Q7TS10 336 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Trpv3Q8K424 791 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Mta1Q8K4B0 715 aaKnown RBP13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Timd2Q8R183 305 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 BsndQ8VIM4 307 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Ttc9bQ9D6E4 239 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Smarcb1Q9Z0H3 385 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 NynrinQ5DTZ0 1840 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Gm20828J3KMI7 228 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 SagP20443 403 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 CtswP56203 371 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Prss53Q571E5 552 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Trit1Q80UN9 467 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 Slc6a15Q8BG16 729 aa13.07□□□□□ -0.32
Pdgfra-205ENSMUST00000201711 B3gnt5Q8BGY6 376 aa13.07□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms