RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Pnma1Q8C1C8 353 aa9.63□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Rbm14Q8C2Q3 669 aaKnown RBP9.63□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ca12Q8CI85 354 aa9.63□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Slc38a1Q8K2P7 485 aa9.63□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 FevQ8QZW2 237 aa9.63□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Elac1Q8VEB6 362 aa9.63□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Nprl3Q8VIJ8 569 aa9.63□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 ArhgdiaQ99PT1 204 aaKnown RBP9.63□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tmem80Q9D3H0 123 aa9.63□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Syvn1Q9DBY1 612 aa9.63□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 RetnlaQ9EP95 111 aa9.63□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Sv2aQ9JIS5 742 aa9.63□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tmem37Q9JJV3 211 aa9.63□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Cngb3Q9JJZ9 694 aa9.63□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ino80eA0A0U1RP99 260 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ptpn3A2ALK8 913 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 A430078G23RikE9Q7Y4 484 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gm5689F6Y2A6 97 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Vmn1r14H3BJ46 303 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Aldh3b3J3QMK6 479 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gm8281L7N235 204 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gm8050L7N2E3 205 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Nek2O35942 443 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Syngr1O55100 234 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Orm2P07361 207 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Kcnc1P15388 511 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Stat5aP42230 793 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Nudt2P56380 147 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Lhx5P61375 402 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 LxnP70202 222 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tmem181aQ3U3W2 474 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Cyp2j11Q3UNV2 504 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 R3hdm4Q4VBF2 262 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gm5414Q6IFZ8 552 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Bud31Q6PGH1 103 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ubash3bQ8BGG7 638 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 B4gat1Q8BWP8 415 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Smoc2Q8CD91 447 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 PiguQ8K358 434 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ace2Q8R0I0 805 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Rnf121Q8R1Z9 327 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Slc35f5Q8R314 524 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Lipt1Q8VCM4 373 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Fam49bQ921M7 324 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tnfaip8Q921Z5 198 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 1700029F12RikQ9CRB4 147 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Q9CZV2 255 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ttyh1Q9D3A9 450 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gm597E9Q8J5 896 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Odc1P00860 461 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 AldoaP05064 364 aaKnown RBP9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Glud1P26443 558 aaKnown RBP9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Adamts1P97857 968 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Eml1Q05BC3 814 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Trim63Q38HM4 350 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gm5113Q3UGK8 141 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 ADGRF3Q58Y75 991 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 PighQ5M9N4 188 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Sema3bQ62177 748 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Znf185Q62394 352 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ddx51Q6P9R1 639 aaKnown RBP9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 2700097O09RikQ6PGK3 301 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ska3Q8C263 411 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gpr158Q8C419 1200 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Mmp28Q8CGV8 520 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Cypt1Q8CH20 168 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gtse1Q8R080 741 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Acsl6Q91WC3 697 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tmco4Q91WU4 631 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Trem2Q99NH8 227 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ndufaf4Q9D1H6 173 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Lingo1Q9D1T0 614 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Chst7Q9EP78 484 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 ClpxQ9JHS4 634 aaKnown RBP9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Cyp2d22Q9JKY7 500 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Skp2Q9Z0Z3 424 aa9.62□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Slc9a6A1L3P4 702 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Gabrr3B2RXA8 464 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ces1bD3Z5G7 567 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Erich1E9PY43 332 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Abhd12bG3UZN6 359 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Rhox2gL7MUB9 191 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Cops5O35864 334 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 PgrQ00175 926 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Lingo4Q149C3 593 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Armc5Q5EBP3 926 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Mocs1Q5RKZ7 636 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Ranbp10Q6VN19 620 aaKnown RBP9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Cnih3Q6ZWS4 160 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Slc16a9Q7TM99 508 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 IpmkQ7TT16 396 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Pum1Q80U78 1189 aaKnown RBP9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Fam212bQ80VY2 300 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Tnfsfm13Q8BXS2 410 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Acat2Q8CAY6 397 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Fam25cQ8CF02 89 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 P3h2Q8CG71 703 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Olfr1504Q8VFQ4 315 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Nck1Q99M51 377 aa9.61□□□□□ -0.87
Hmgb1-201ENSMUST00000085546 Mrpl57Q9CQF8 102 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms