RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Cyp2c69E9PXC3 491 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Zfp938E9Q9G3 579 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Akain1G3UWD5 69 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm8897L7N294 181 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Lire1P11260 357 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Klrb1bP27812 223 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Klrb1cP27814 223 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Hoxc11P31313 304 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 GlrbP48168 496 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 SobpQ0P5V2 864 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 SynaQ5G5D5 617 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Wfikkn2Q7TQN3 571 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Zmym6Q8BS54 1249 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Lmcd1Q8VEE1 365 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Cep97Q9CZ62 856 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Fut2Q9JL27 347 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Sae1Q9R1T2 350 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 M1apQ9Z0E1 529 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Sept5Q9Z2Q6 369 aa11.2□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Fam131cA2ADB2 273 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Zfp780bE9Q2S6 806 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Olfr743L7N1Y2 311 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Pabpc1P29341 636 aaKnown RBP11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Abraxas2Q3TCJ1 415 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Zfp607aQ3TQG9 686 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Nek10Q3UGM2 1111 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Six4Q61321 775 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 DgkbQ6NS52 802 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Q8CC96 669 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Q8CCC3 530 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ifnl3Q8CGK6 193 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Glis2Q8VDL9 521 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 AdprmQ99KS6 340 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 EtfaQ99LC5 333 aaKnown RBP11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 March2Q99M02 246 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ift27Q9D0P8 186 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ly6iQ9WU67 134 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ptch2O35595 1182 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 WarsP32921 481 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Serpind1P49182 478 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Cyp2c40P56657 491 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Adgrg7Q8BM96 785 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ckap4Q8BMK4 575 aaKnown RBP11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ctxn3Q8BXZ0 80 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Pdcd2lQ8C5N5 364 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 AcmsdQ8R519 336 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ptgr2Q8VDQ1 351 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Dlg2Q91XM9 852 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Tpgs1Q99MS8 303 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 XpotQ9CRT8 963 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Q9D1K7 174 aaKnown RBP11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Plpp6Q9D4F2 292 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Usp12Q9D9M2 370 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 PolkQ9QUG2 852 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Enpp2Q9R1E6 862 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Khdrbs3Q9R226 346 aaKnown RBP11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ep400Q8CHI8 3072 aaKnown RBP11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Baz2bA2AUY4 2123 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Shank3Q4ACU6 1730 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm3604A0A087WPN2 559 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Arhgap36B1AUC7 590 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 TagapB2RWW0 714 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 OstnP61364 130 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ccdc85aQ5SP85 500 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 VwdeQ6DFV8 926 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Pex11gQ6P6M5 241 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Rasa4Q6PFQ7 802 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Guf1Q8C3X4 651 aaKnown RBP11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Slc49a3Q8CE47 516 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Pcdhga11Q91XY8 933 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 CatsperzQ9CQP8 194 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Ints11Q9CWS4 600 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Q9CZV2 255 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Scube2Q9JJS0 997 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Vmn2r73D3Z7M3 851 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Atxn2O70305 1285 aaKnown RBP11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Esr1P19785 599 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Adra2bP30545 450 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Kcnj13P86046 360 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 ArvcfP98203 962 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Pdcd4Q61823 469 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Pik3c3Q6PF93 887 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Wipi2Q80W47 445 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Nipal1Q8BMW7 416 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Amer2Q8CCJ4 672 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Nol6Q8R5K4 1152 aaKnown RBP11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Utp6Q8VCY6 597 aaKnown RBP11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Olfr806Q8VFI2 313 aa11.19□□□□□ -0.62
Topbp1-201ENSMUST00000035164 6720489N17RikA0A1Y7VJW0 127 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm7073E9QAS1 335 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Med22Q62276 200 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Fam131aQ8BWU3 361 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 PolbQ8K409 335 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Fubp1Q91WJ8 651 aaKnown RBP11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Adh6aE9Q5Z6 375 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gm8879F6R3J9 157 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Gp5O08742 567 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Mtnd1P03888 318 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 JunP05627 334 aa11.18□□□□□ -0.62
Topbp1-201ENSMUST00000035164 Igfbp5Q07079 271 aa11.18□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 44.2 ms