RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Ano7Q14AT5 859 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 H2-M3Q31093 336 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 CblbQ3TTA7 982 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 A630001G21RikQ3UTB2 229 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 PeloQ80X73 385 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Zdhhc19Q810M5 347 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Stx16Q8BVI5 326 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Fam161aQ8QZV6 448 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Nae1Q8VBW6 534 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Nrif1Q923B3 828 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Chst12Q99LL3 419 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Itgb3bpQ9CQ82 176 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Fam90a1bQ9D4F3 419 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 CtsmQ9JL96 333 aa9.08□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Fbxo47A2A6H3 451 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Atp6ap1lD3Z5W0 336 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Fbxl18E9PYR1 771 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Tpst2O88856 376 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 PdgfrbP05622 1098 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Mboat4P0C7A3 435 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Rpl7aP12970 266 aaKnown RBP9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Wnt3aP27467 352 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 TktP40142 623 aaKnown RBP9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Hnf4aP49698 474 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Znf800Q0VEE6 662 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Pld5Q3UNN8 536 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Trnau1apQ80VC6 287 aaKnown RBP9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Svs2Q8BS30 375 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Usp43Q8BUM9 1132 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 PpcdcQ8BZB2 204 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Dus1lQ8C2P3 475 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Aqp12Q8CHJ2 290 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Thap1Q8CHW1 210 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Ago3Q8CJF9 860 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Dsn1Q9CYC5 348 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Akr1a1Q9JII6 325 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Psmc3ipO35047 217 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 GnazO70443 355 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Gh1P06880 216 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Mup4P11590 178 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Cyp2f2P33267 491 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 FshrP35378 692 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Pdha2P35487 391 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Gata5P97489 404 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Kat7Q5SVQ0 613 aaKnown RBP9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Man2a2Q8BRK9 1152 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 TpbglQ8C013 384 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Q8CD60 292 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Crispld1Q8CGD2 500 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Syn3Q8JZP2 579 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Glis1Q8K1M4 789 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Ces2aQ8QZR3 558 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Klhl25Q8R2P1 589 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Slc9a8Q8R4D1 576 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Rhobtb2Q91V93 728 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Emc3Q99KI3 261 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Cst11Q9D269 139 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Ephx1Q9D379 455 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Hspb11Q9D6H2 143 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 P2yr13Q9D8I2 337 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Sars2Q9JJL8 518 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Btbd19S4R1I0 287 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Abca9Q8K449 1623 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Gm16494E9Q2Z4 87 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Aknad1E9Q8N6 675 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Zfp938E9Q9G3 579 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Cd48P18181 240 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Gria2P23819 883 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Oaz1P54369 227 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Fbp2P70695 339 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Il6stQ00560 917 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Gdpgp1Q3TLS3 386 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Kiaa0895Q7TQE7 519 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Znf423Q80TS5 1292 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Dnajb13Q80Y75 316 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Timmdc1Q8BUY5 285 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Slc39a13Q8BZH0 361 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Fam221bQ8C627 487 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Q8CDN1 933 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Ppp1r11Q8K1L5 131 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Csde1Q91W50 798 aaKnown RBP9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Chil4Q91Z98 402 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 DdoQ922Z0 341 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Q9D4W2 315 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Tex47Q9D5W8 253 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Sec23bQ9D662 767 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Oser1Q9D722 291 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Tysnd1Q9DBA6 568 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Smad9Q9JIW5 430 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Trim3Q9R1R2 744 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Slc25a54B1AUS6 473 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Olfr603L7N1Y4 312 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 DldO08749 509 aaKnown RBP9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Serpinf1P97298 417 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Dennd1bQ3U1T9 766 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Rnf180Q3U827 592 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Tmem199Q5SYH2 208 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Q810N5 247 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 FicdQ8BIX9 458 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Fam92aQ8BP22 355 aa9.07□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms