RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 CCDC126Q96EE4 140 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 DCUN1D1Q96GG9 259 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 EBF4Q9BQW3 602 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 SLC2A4RGQ9NR83 387 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 ZDHHC2Q9UIJ5 367 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 HAO1Q9UJM8 370 aa17.32■□□□□ 0.36
PHGDH-232ENST00000641947 ZFR2Q9UPR6 939 aaKnown RBP17.32■□□□□ 0.36
PHGDH-232ENST00000641947 NCF1BA6NI72 391 aaPredicted RBP17.31■□□□□ 0.36
PHGDH-232ENST00000641947 NCF1CA8MVU1 366 aaPredicted RBP17.31■□□□□ 0.36
PHGDH-232ENST00000641947 KLK8O60259 260 aa17.31■□□□□ 0.36
PHGDH-232ENST00000641947 SMIM24O75264 130 aa17.31■□□□□ 0.36
PHGDH-232ENST00000641947 TPBGLP0DKB5 382 aa17.31■□□□□ 0.36
PHGDH-232ENST00000641947 NCF1P14598 390 aaPredicted RBP17.31■□□□□ 0.36
PHGDH-232ENST00000641947 IMPDH1P20839 514 aa17.31■□□□□ 0.36
PHGDH-232ENST00000641947 MRPS21P82921 87 aaKnown RBP17.31■□□□□ 0.36
PHGDH-232ENST00000641947 TDGQ13569 410 aa17.31■□□□□ 0.36
PHGDH-232ENST00000641947 FGL2Q14314 439 aa17.31■□□□□ 0.36
PHGDH-232ENST00000641947 SLC44A4Q53GD3 710 aa17.31■□□□□ 0.36
PHGDH-232ENST00000641947 LDLRAP1Q5SW96 308 aa17.31■□□□□ 0.36
PHGDH-232ENST00000641947 FRMD7Q6ZUT3 714 aa17.31■□□□□ 0.36
PHGDH-232ENST00000641947 SLC22A9Q8IVM8 553 aa17.31■□□□□ 0.36
PHGDH-232ENST00000641947 FAM3CQ92520 227 aa17.31■□□□□ 0.36
PHGDH-232ENST00000641947 PRR11Q96HE9 360 aaPredicted RBP17.31■□□□□ 0.36
PHGDH-232ENST00000641947 PANX3Q96QZ0 392 aa17.31■□□□□ 0.36
PHGDH-232ENST00000641947 FBXL12Q9NXK8 326 aa17.31■□□□□ 0.36
PHGDH-232ENST00000641947 KCTD5Q9NXV2 234 aa17.31■□□□□ 0.36
PHGDH-232ENST00000641947 CDYLQ9Y232 598 aa17.31■□□□□ 0.36
PHGDH-232ENST00000641947 ASB1Q9Y576 335 aa17.31■□□□□ 0.36
PHGDH-232ENST00000641947 ANKRD65E5RJM6 399 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 UBFD1O14562 309 aaKnown RBP17.3■□□□□ 0.36
PHGDH-232ENST00000641947 TSPAN6O43657 245 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 MAGEC1O60732 1142 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 PCDH8O95206 1070 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 ALOX15P16050 662 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-232ENST00000641947 TSPAN8P19075 237 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 DGKAP23743 735 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 GPR1P46091 355 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 AGTR2P50052 363 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 HERVK_113P63132 956 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 TMEM115Q12893 351 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-232ENST00000641947 VWA5B1Q5TIE3 1220 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 PHYKPLQ8IUZ5 450 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 MAPK15Q8TD08 544 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 NSUN5Q96P11 429 aaKnown RBP17.3■□□□□ 0.36
PHGDH-232ENST00000641947 ERVK-6Q9BXR3 956 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 KCNK4Q9NYG8 393 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 UTP6Q9NYH9 597 aaKnown RBP17.3■□□□□ 0.36
PHGDH-232ENST00000641947 RAP2CQ9Y3L5 183 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 TMEM233B4DJY2 109 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 LOC730098B7Z3J9 87 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 CFAP99D6REC4 459 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 AP2A2O94973 939 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 GFAPP14136 432 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 GLULP15104 373 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 ASPHQ12797 758 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 TUBB3Q13509 450 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 TGFBIQ15582 683 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 WSCD2Q2TBF2 565 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 ADGRG6Q86SQ4 1221 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 ALYREFQ86V81 257 aaKnown RBP17.3■□□□□ 0.36
PHGDH-232ENST00000641947 NLRP8Q86W28 1048 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 FBXO39Q8N4B4 442 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 DEFB123Q8N688 67 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 SKA1Q96BD8 255 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 CNDP1Q96KN2 507 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 MYLK2Q9H1R3 596 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 PRDM6Q9NQX0 595 aa17.3■□□□□ 0.36
PHGDH-232ENST00000641947 PCYT1BQ9Y5K3 369 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-232ENST00000641947 PPP6CO00743 305 aa17.29■□□□□ 0.36
PHGDH-232ENST00000641947 PLRG1O43660 514 aaKnown RBP17.29■□□□□ 0.36
PHGDH-232ENST00000641947 LILRB5O75023 590 aa17.29■□□□□ 0.36
PHGDH-232ENST00000641947 TM7SF2O76062 418 aa17.29■□□□□ 0.36
PHGDH-232ENST00000641947 UBOX5O94941 541 aa17.29■□□□□ 0.36
PHGDH-232ENST00000641947 DNTTP04053 509 aa17.29■□□□□ 0.36
PHGDH-232ENST00000641947 JUNP05412 331 aaKnown RBP17.29■□□□□ 0.36
PHGDH-232ENST00000641947 C7P10643 843 aa17.29■□□□□ 0.36
PHGDH-232ENST00000641947 PRLHRP49683 370 aa17.29■□□□□ 0.36
PHGDH-232ENST00000641947 RGS4P49798 205 aa17.29■□□□□ 0.36
PHGDH-232ENST00000641947 ADPRHP54922 357 aa17.29■□□□□ 0.36
PHGDH-232ENST00000641947 BOP1Q14137 746 aaKnown RBP17.29■□□□□ 0.36
PHGDH-232ENST00000641947 PHKG1Q16816 387 aa17.29■□□□□ 0.36
PHGDH-232ENST00000641947 C18orf21Q32NC0 220 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-232ENST00000641947 CFAP157Q5JU67 520 aa17.29■□□□□ 0.36
PHGDH-232ENST00000641947 Q6ZS52 159 aa17.29■□□□□ 0.36
PHGDH-232ENST00000641947 TRMT11Q7Z4G4 463 aaKnown RBP17.29■□□□□ 0.36
PHGDH-232ENST00000641947 GPSM1Q86YR5 675 aa17.29■□□□□ 0.36
PHGDH-232ENST00000641947 WDR75Q8IWA0 830 aaKnown RBP17.29■□□□□ 0.36
PHGDH-232ENST00000641947 MYO1HQ8N1T3 1032 aa17.29■□□□□ 0.36
PHGDH-232ENST00000641947 LILRA3Q8N6C8 439 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-232ENST00000641947 KLK6Q92876 244 aa17.29■□□□□ 0.36
PHGDH-232ENST00000641947 LENG8Q96PV6 779 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-232ENST00000641947 PLCD4Q9BRC7 762 aa17.29■□□□□ 0.36
PHGDH-232ENST00000641947 OSBPL6Q9BZF3 934 aa17.29■□□□□ 0.36
PHGDH-232ENST00000641947 ILKAPQ9H0C8 392 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-232ENST00000641947 FBRSQ9HAH7 460 aa17.29■□□□□ 0.36
PHGDH-232ENST00000641947 MBNL1Q9NR56 388 aaKnown RBP17.29■□□□□ 0.36
PHGDH-232ENST00000641947 KLHL42Q9P2K6 505 aa17.29■□□□□ 0.36
PHGDH-232ENST00000641947 HEY2Q9UBP5 337 aa17.29■□□□□ 0.36
PHGDH-232ENST00000641947 GULP1Q9UBP9 304 aa17.29■□□□□ 0.36
PHGDH-232ENST00000641947 NDRG2Q9UN36 371 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms