RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 GID8Q9NWU2 228 aa16.84■□□□□ 0.29
PHGDH-211ENST00000641213 RAB26Q9ULW5 256 aa16.84■□□□□ 0.29
PHGDH-211ENST00000641213 SUFUQ9UMX1 484 aa16.84■□□□□ 0.29
PHGDH-211ENST00000641213 OR7A17O14581 309 aa16.83■□□□□ 0.28
PHGDH-211ENST00000641213 FFAR2O15552 330 aa16.83■□□□□ 0.28
PHGDH-211ENST00000641213 TRIM16O95361 564 aa16.83■□□□□ 0.28
PHGDH-211ENST00000641213 S100BP04271 92 aaPredicted RBP16.83■□□□□ 0.28
PHGDH-211ENST00000641213 HSPA8P11142 646 aaKnown RBP16.83■□□□□ 0.28
PHGDH-211ENST00000641213 SRCP12931 536 aa16.83■□□□□ 0.28
PHGDH-211ENST00000641213 SLC7A1P30825 629 aa16.83■□□□□ 0.28
PHGDH-211ENST00000641213 UFM1P61960 85 aa16.83■□□□□ 0.28
PHGDH-211ENST00000641213 ERVK-8P63133 956 aa16.83■□□□□ 0.28
PHGDH-211ENST00000641213 YBX1P67809 324 aaKnown RBP16.83■□□□□ 0.28
PHGDH-211ENST00000641213 RCAN2Q14206 197 aa16.83■□□□□ 0.28
PHGDH-211ENST00000641213 GRM2Q14416 872 aa16.83■□□□□ 0.28
PHGDH-211ENST00000641213 CAPRIN1Q14444 709 aaKnown RBP16.83■□□□□ 0.28
PHGDH-211ENST00000641213 C6orf136Q5SQH8 315 aa16.83■□□□□ 0.28
PHGDH-211ENST00000641213 LYPLAL1Q5VWZ2 237 aa16.83■□□□□ 0.28
PHGDH-211ENST00000641213 UGT2A3Q6UWM9 527 aa16.83■□□□□ 0.28
PHGDH-211ENST00000641213 CMTM8Q8IZV2 173 aa16.83■□□□□ 0.28
PHGDH-211ENST00000641213 PDPRQ8NCN5 879 aa16.83■□□□□ 0.28
PHGDH-211ENST00000641213 LRRC58Q96CX6 371 aa16.83■□□□□ 0.28
PHGDH-211ENST00000641213 C1orf50Q9BV19 199 aa16.83■□□□□ 0.28
PHGDH-211ENST00000641213 SLC46A2Q9BY10 475 aa16.83■□□□□ 0.28
PHGDH-211ENST00000641213 RIC8BQ9NVN3 520 aa16.83■□□□□ 0.28
PHGDH-211ENST00000641213 CRLS1Q9UJA2 301 aa16.83■□□□□ 0.28
PHGDH-211ENST00000641213 A0A1W2PP18 115 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 ASPDHA6ND91 283 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 NPIPB15A6NHN6 443 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-211ENST00000641213 RAD51BO15315 384 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 C8AP07357 584 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 ACRP10323 421 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 DGKAP23743 735 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 SLC6A2P23975 617 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 SPAM1P38567 509 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 RGS4P49798 205 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 KCNK10P57789 538 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 GTF2H2Q13888 395 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 PDCD4Q53EL6 469 aaKnown RBP16.82■□□□□ 0.28
PHGDH-211ENST00000641213 FOXB2Q5VYV0 432 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 GRAMD4Q6IC98 578 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 GTF2H2CQ6P1K8 395 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 Q6ZSR9 355 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 MYO1HQ8N1T3 1032 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 CBARPQ8N350 705 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-211ENST00000641213 MARVELD2Q8N4S9 558 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 LRTOMTQ8WZ04 291 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 VPS33AQ96AX1 596 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 YIPF3Q9GZM5 350 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 NSUN3Q9H649 340 aaKnown RBP16.82■□□□□ 0.28
PHGDH-211ENST00000641213 CMTM6Q9NX76 183 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 SLC22A3O75751 556 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 GLUD1P00367 558 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 TIMP1P01033 207 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 CAPN1P07384 714 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 HSD17B1P14061 328 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 ATP6V1B2P21281 511 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 ARL1P40616 181 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-211ENST00000641213 SNRPD1P62314 119 aaKnown RBP16.82■□□□□ 0.28
PHGDH-211ENST00000641213 SEMG2Q02383 582 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 FOXM1Q08050 763 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 GPR33Q49SQ1 333 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 GPRC6AQ5T6X5 926 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 CRTC1Q6UUV9 634 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 MACC1Q6ZN28 852 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 CCDC149Q6ZUS6 474 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 ZBTB2Q8N680 514 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 GPR26Q8NDV2 337 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 METTL6Q8TCB7 284 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 ZUFSPQ96AP4 578 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 PBXIP1Q96AQ6 731 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 LYSMD1Q96S90 227 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 CORO1BQ9BR76 489 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 FAM126AQ9BYI3 521 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-211ENST00000641213 SEMA6AQ9H2E6 1030 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 ELOVL2Q9NXB9 296 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 PTBP2Q9UKA9 531 aaKnown RBP16.82■□□□□ 0.28
PHGDH-211ENST00000641213 CNOT11Q9UKZ1 510 aaKnown RBP16.82■□□□□ 0.28
PHGDH-211ENST00000641213 OARD1Q9Y530 152 aa16.82■□□□□ 0.28
PHGDH-211ENST00000641213 TAPBPO15533 448 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 KIF1CO43896 1103 aaKnown RBP16.81■□□□□ 0.28
PHGDH-211ENST00000641213 SYNCRIPO60506 623 aaKnown RBP16.81■□□□□ 0.28
PHGDH-211ENST00000641213 STAMBPO95630 424 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 GUCA1CO95843 209 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 HLA-FP30511 346 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 HTR6P50406 440 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 CHN2P52757 468 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 MYLK3Q32MK0 819 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 ATP6AP1LQ52LC2 224 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 NXPE1Q8N323 547 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 ELMOD1Q8N336 334 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 SFRP1Q8N474 314 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 GALNT4Q8N4A0 578 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 OR4F6Q8NGB9 312 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 OR2T34Q8NGX1 318 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 OR2T3Q8NH03 318 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 UHRF1Q96T88 793 aaPredicted RBP16.81■□□□□ 0.28
PHGDH-211ENST00000641213 HTATIP2Q9BUP3 242 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 Q9H521 79 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 HECAQ9UBI9 543 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms