RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, human

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-222	ENST00000640072	DDX4	Q9NQI0	724 aa	Known RBP	6.1	□□□□□ -1.43
NECAP1-222	ENST00000640072	ARHGAP20	Q9P2F6	1191 aa		6.1	□□□□□ -1.43
NECAP1-222	ENST00000640072	CDH7	Q9ULB5	785 aa		6.1	□□□□□ -1.43
NECAP1-222	ENST00000640072	FRMPD1	Q5SYB0	1578 aa		6.1	□□□□□ -1.43
NECAP1-222	ENST00000640072	TRAPPC8	Q9Y2L5	1435 aa		6.1	□□□□□ -1.43
NECAP1-222	ENST00000640072		H3BMQ9	156 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	NEMP1	O14524	444 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	CSDE1	O75534	798 aa	Known RBP	6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	TTLL1	O95922	423 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	CD48	P09326	243 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	OGN	P20774	298 aa	Known RBP	6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	OXTR	P30559	389 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	CHRNA3	P32297	505 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	CSNK1D	P48730	415 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	TPMT	P51580	245 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	ERVFC1	P60507	584 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	DEFA6	Q01524	100 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	BNC1	Q01954	994 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	CHRND	Q07001	517 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	BTN1A1	Q13410	526 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	MPP2	Q14168	576 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	MFSD10	Q14728	455 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	PON3	Q15166	354 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	ARHGAP17	Q68EM7	881 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	FUT10	Q6P4F1	479 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	INTS5	Q6P9B9	1019 aa	Known RBP	6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	PET117	Q6UWS5	81 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	HDDC2	Q7Z4H3	204 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	SNX29P2	Q8IUI4	249 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	PLD3	Q8IV08	490 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	METTL13	Q8N6R0	699 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	CMAS	Q8NFW8	434 aa	Predicted RBP	6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	OR13C2	Q8NGS9	318 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	PRRG3	Q9BZD7	231 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	CREBZF	Q9NS37	354 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	DECR2	Q9NUI1	292 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	TJP2	Q9UDY2	1190 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	ZNF225	Q9UK10	706 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	ITGA11	Q9UKX5	1188 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	PNPLA7	Q6ZV29	1317 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072		A0A075B6Q4	140 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072		A0A0D9SFI3	127 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072		A0A0U1RQV5	110 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	PJA2	O43164	708 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	CALU	O43852	315 aa	Predicted RBP	6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	CKM	P06732	381 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	YBX3	P16989	372 aa	Known RBP eCLIP	6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	PTPN1	P18031	435 aa	Known RBP	6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	RFC2	P35250	354 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	EIF2S3	P41091	472 aa	Known RBP	6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	OPRL1	P41146	370 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	BUD31	P41223	144 aa	Predicted RBP	6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	KLK7	P49862	253 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	DEFA1	P59665	94 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	DEFA3	P59666	94 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	REEP5	Q00765	189 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	PDIA2	Q13087	525 aa	Known RBP	6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	SLC13A2	Q13183	592 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	KRR1	Q13601	381 aa	Known RBP	6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	PDK4	Q16654	411 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	PLA1A	Q53H76	456 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	RUNDC3A	Q59EK9	446 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	FAM91A1	Q658Y4	838 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	C18orf63	Q68DL7	685 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	DPY19L3	Q6ZPD9	716 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	HDDC3	Q8N4P3	179 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	OR8K5	Q8NH50	307 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	HM13	Q8TCT9	377 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	MAFIP	Q8WZ33	124 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	ELP4	Q96EB1	424 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	TSSK1B	Q9BXA7	367 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	GSDMC	Q9BYG8	508 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	MAGEH1	Q9H213	219 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	OR51V1	Q9H2C8	321 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	TRABD	Q9H4I3	376 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	MKNK2	Q9HBH9	465 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	NMRK2	Q9NPI5	230 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	ING3	Q9NXR8	418 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	AMFR	Q9UKV5	643 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	SARDH	Q9UL12	918 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	OGDHL	Q9ULD0	1010 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	PSMD13	Q9UNM6	376 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	PLAGL2	Q9UPG8	496 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	MRPS2	Q9Y399	296 aa	Known RBP	6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	PCDHA10	Q9Y5I2	948 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	PFAS	O15067	1338 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	ZC3H13	Q5T200	1668 aa	Known RBP	6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	MYH2	Q9UKX2	1941 aa		6.09	□□□□□ -1.43
NECAP1-222	ENST00000640072	FAM92A	A1XBS5	289 aa		6.09	□□□□□ -1.44
NECAP1-222	ENST00000640072	TMX2-CTNND1	H3BSU7	103 aa		6.09	□□□□□ -1.44
NECAP1-222	ENST00000640072		M0R3G1	203 aa		6.09	□□□□□ -1.44
NECAP1-222	ENST00000640072	PODXL	O00592	558 aa		6.09	□□□□□ -1.44
NECAP1-222	ENST00000640072	NKRF	O15226	690 aa	Known RBP eCLIP	6.09	□□□□□ -1.44
NECAP1-222	ENST00000640072	MATN3	O15232	486 aa		6.09	□□□□□ -1.44
NECAP1-222	ENST00000640072	MED6	O75586	246 aa		6.09	□□□□□ -1.44
NECAP1-222	ENST00000640072	NSA2	O95478	260 aa	Known RBP	6.09	□□□□□ -1.44
NECAP1-222	ENST00000640072	MYL2	P10916	166 aa		6.09	□□□□□ -1.44
NECAP1-222	ENST00000640072	CD247	P20963	164 aa		6.09	□□□□□ -1.44
NECAP1-222	ENST00000640072	PTPN6	P29350	595 aa		6.09	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 51 ms