RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 SMC5Q8IY18 1101 aa4.37□□□□□ -1.71
CCDC7-216ENST00000640058 PDILTQ8N807 584 aa4.37□□□□□ -1.71
CCDC7-216ENST00000640058 PCYOX1LQ8NBM8 494 aa4.37□□□□□ -1.71
CCDC7-216ENST00000640058 RFFLQ8WZ73 363 aa4.37□□□□□ -1.71
CCDC7-216ENST00000640058 SMPDL3BQ92485 455 aa4.37□□□□□ -1.71
CCDC7-216ENST00000640058 ARHGEF2Q92974 986 aaKnown RBP4.37□□□□□ -1.71
CCDC7-216ENST00000640058 RHNO1Q9BSD3 238 aa4.37□□□□□ -1.71
CCDC7-216ENST00000640058 SLC26A6Q9BXS9 759 aa4.37□□□□□ -1.71
CCDC7-216ENST00000640058 PELI2Q9HAT8 420 aa4.37□□□□□ -1.71
CCDC7-216ENST00000640058 SIX2Q9NPC8 291 aa4.37□□□□□ -1.71
CCDC7-216ENST00000640058 MBNL1Q9NR56 388 aaKnown RBP4.37□□□□□ -1.71
CCDC7-216ENST00000640058 SETD4Q9NVD3 440 aa4.37□□□□□ -1.71
CCDC7-216ENST00000640058 IRAK4Q9NWZ3 460 aa4.37□□□□□ -1.71
CCDC7-216ENST00000640058 EHD2Q9NZN4 543 aa4.37□□□□□ -1.71
CCDC7-216ENST00000640058 CACNG5Q9UF02 275 aa4.37□□□□□ -1.71
CCDC7-216ENST00000640058 DBNLQ9UJU6 430 aaKnown RBP4.37□□□□□ -1.71
CCDC7-216ENST00000640058 PIAS3Q9Y6X2 628 aa4.37□□□□□ -1.71
CCDC7-216ENST00000640058 A0A087X002 238 aa4.36□□□□□ -1.71
CCDC7-216ENST00000640058 TEX13DA0A0J9YY54 714 aaPredicted RBP4.36□□□□□ -1.71
CCDC7-216ENST00000640058 CCNDBP1O95273 360 aa4.36□□□□□ -1.71
CCDC7-216ENST00000640058 HIST1H2ABP04908 130 aa4.36□□□□□ -1.71
CCDC7-216ENST00000640058 ZNF26P17031 533 aaPredicted RBP4.36□□□□□ -1.71
CCDC7-216ENST00000640058 HIST1H2ADP20671 130 aa4.36□□□□□ -1.71
CCDC7-216ENST00000640058 CBLP22681 906 aa4.36□□□□□ -1.71
CCDC7-216ENST00000640058 ACADLP28330 430 aa4.36□□□□□ -1.71
CCDC7-216ENST00000640058 KRT9P35527 623 aa4.36□□□□□ -1.71
CCDC7-216ENST00000640058 GPR143P51810 404 aa4.36□□□□□ -1.71
CCDC7-216ENST00000640058 THOP1P52888 689 aa4.36□□□□□ -1.71
CCDC7-216ENST00000640058 IRX1P78414 480 aaPredicted RBP4.36□□□□□ -1.71
CCDC7-216ENST00000640058 EIF4A2Q14240 407 aaKnown RBP4.36□□□□□ -1.71
CCDC7-216ENST00000640058 INTS11Q5TA45 600 aaKnown RBP4.36□□□□□ -1.71
CCDC7-216ENST00000640058 GKAP1Q5VSY0 366 aaPredicted RBP4.36□□□□□ -1.71
CCDC7-216ENST00000640058 NCEH1Q6PIU2 408 aa4.36□□□□□ -1.71
CCDC7-216ENST00000640058 HIST3H2AQ7L7L0 130 aa4.36□□□□□ -1.71
CCDC7-216ENST00000640058 GALNT13Q8IUC8 556 aa4.36□□□□□ -1.71
CCDC7-216ENST00000640058 CEP97Q8IW35 865 aa4.36□□□□□ -1.71
CCDC7-216ENST00000640058 DDHD1Q8NEL9 900 aa4.36□□□□□ -1.71
CCDC7-216ENST00000640058 OR2T12Q8NG77 320 aa4.36□□□□□ -1.71
CCDC7-216ENST00000640058 ANKRD9Q96BM1 317 aaPredicted RBP4.36□□□□□ -1.71
CCDC7-216ENST00000640058 ZNF653Q96CK0 615 aa4.36□□□□□ -1.71
CCDC7-216ENST00000640058 NUDCD1Q96RS6 583 aa4.36□□□□□ -1.71
CCDC7-216ENST00000640058 FGF22Q9HCT0 170 aa4.36□□□□□ -1.71
CCDC7-216ENST00000640058 MIOSQ9NXC5 875 aa4.36□□□□□ -1.71
CCDC7-216ENST00000640058 OGFRQ9NZT2 677 aa4.36□□□□□ -1.71
CCDC7-216ENST00000640058 TSPYL4Q9UJ04 414 aa4.36□□□□□ -1.71
CCDC7-216ENST00000640058 GPC4O75487 556 aa4.35□□□□□ -1.71
CCDC7-216ENST00000640058 TBX18O95935 607 aa4.35□□□□□ -1.71
CCDC7-216ENST00000640058 CEACAM1P13688 526 aa4.35□□□□□ -1.71
CCDC7-216ENST00000640058 SELLP14151 372 aa4.35□□□□□ -1.71
CCDC7-216ENST00000640058 PPP2R2BQ00005 443 aa4.35□□□□□ -1.71
CCDC7-216ENST00000640058 PRKAA1Q13131 559 aa4.35□□□□□ -1.71
CCDC7-216ENST00000640058 ITGA9Q13797 1035 aa4.35□□□□□ -1.71
CCDC7-216ENST00000640058 ZDHHC20Q5W0Z9 365 aa4.35□□□□□ -1.71
CCDC7-216ENST00000640058 CLEC17AQ6ZS10 378 aa4.35□□□□□ -1.71
CCDC7-216ENST00000640058 ZNF534Q76KX8 674 aa4.35□□□□□ -1.71
CCDC7-216ENST00000640058 CRYBG2Q8N1P7 616 aa4.35□□□□□ -1.71
CCDC7-216ENST00000640058 IL17REQ8NFR9 667 aa4.35□□□□□ -1.71
CCDC7-216ENST00000640058 TRPC4APQ8TEL6 797 aa4.35□□□□□ -1.71
CCDC7-216ENST00000640058 TMEM143Q96AN5 459 aa4.35□□□□□ -1.71
CCDC7-216ENST00000640058 ECHDC1Q9NTX5 307 aa4.35□□□□□ -1.71
CCDC7-216ENST00000640058 CORO1CQ9ULV4 474 aaPredicted RBP4.35□□□□□ -1.71
CCDC7-216ENST00000640058 TMEM98Q9Y2Y6 226 aa4.35□□□□□ -1.71
CCDC7-216ENST00000640058 PLEKHD1A6NEE1 506 aa4.34□□□□□ -1.71
CCDC7-216ENST00000640058 CRLF1O75462 422 aa4.34□□□□□ -1.71
CCDC7-216ENST00000640058 NGFP01138 241 aa4.34□□□□□ -1.71
CCDC7-216ENST00000640058 LIFP15018 202 aa4.34□□□□□ -1.71
CCDC7-216ENST00000640058 PSMC4P43686 418 aa4.34□□□□□ -1.71
CCDC7-216ENST00000640058 MFAP5Q13361 173 aa4.34□□□□□ -1.71
CCDC7-216ENST00000640058 GTDC1Q4AE62 458 aa4.34□□□□□ -1.71
CCDC7-216ENST00000640058 LCE3CQ5T5A8 94 aa4.34□□□□□ -1.71
CCDC7-216ENST00000640058 ARHGEF16Q5VV41 709 aa4.34□□□□□ -1.71
CCDC7-216ENST00000640058 MMS22LQ6ZRQ5 1243 aa4.34□□□□□ -1.71
CCDC7-216ENST00000640058 DENND5BQ6ZUT9 1274 aa4.34□□□□□ -1.71
CCDC7-216ENST00000640058 FASTKD5Q7L8L6 764 aaKnown RBP4.34□□□□□ -1.71
CCDC7-216ENST00000640058 ISCA2Q86U28 154 aa4.34□□□□□ -1.71
CCDC7-216ENST00000640058 EXOC8Q8IYI6 725 aa4.34□□□□□ -1.71
CCDC7-216ENST00000640058 NAXEQ8NCW5 288 aa4.34□□□□□ -1.71
CCDC7-216ENST00000640058 MAPK1IP1LQ8NDC0 245 aa4.34□□□□□ -1.71
CCDC7-216ENST00000640058 TDRD7Q8NHU6 1098 aaKnown RBP4.34□□□□□ -1.71
CCDC7-216ENST00000640058 DDOQ99489 341 aa4.34□□□□□ -1.71
CCDC7-216ENST00000640058 WDR13Q9H1Z4 485 aa4.34□□□□□ -1.71
CCDC7-216ENST00000640058 PLK3Q9H4B4 646 aa4.34□□□□□ -1.71
CCDC7-216ENST00000640058 SMC4Q9NTJ3 1288 aa4.34□□□□□ -1.71
CCDC7-216ENST00000640058 MTMR6Q9Y217 621 aa4.34□□□□□ -1.71
CCDC7-216ENST00000640058 PYGO1Q9Y3Y4 419 aa4.34□□□□□ -1.71
CCDC7-216ENST00000640058 TMEM8BA6NDV4 472 aa4.33□□□□□ -1.72
CCDC7-216ENST00000640058 LIPT2A6NK58 231 aa4.33□□□□□ -1.72
CCDC7-216ENST00000640058 OR6C76A6NM76 312 aa4.33□□□□□ -1.72
CCDC7-216ENST00000640058 SH2B2O14492 632 aaPredicted RBP4.33□□□□□ -1.72
CCDC7-216ENST00000640058 GPR137BO60478 399 aa4.33□□□□□ -1.72
CCDC7-216ENST00000640058 TMCC2O75069 709 aa4.33□□□□□ -1.72
CCDC7-216ENST00000640058 RARGP13631 454 aa4.33□□□□□ -1.72
CCDC7-216ENST00000640058 KRT5P13647 590 aa4.33□□□□□ -1.72
CCDC7-216ENST00000640058 TMEM11P17152 192 aa4.33□□□□□ -1.72
CCDC7-216ENST00000640058 PPARGP37231 505 aaPredicted RBP4.33□□□□□ -1.72
CCDC7-216ENST00000640058 LUMP51884 338 aaPredicted RBP4.33□□□□□ -1.72
CCDC7-216ENST00000640058 CDH11P55287 796 aa4.33□□□□□ -1.72
CCDC7-216ENST00000640058 TPRG1Q6ZUI0 275 aa4.33□□□□□ -1.72
CCDC7-216ENST00000640058 STXBP4Q6ZWJ1 553 aa4.33□□□□□ -1.72
CCDC7-216ENST00000640058 TMTC3Q6ZXV5 915 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms