RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 TMC3Q7Z5M5 1100 aa14.69□□□□□ -0.06
SYNE2-228ENST00000639659 NT5DC3Q86UY8 548 aa14.69□□□□□ -0.06
SYNE2-228ENST00000639659 PQLC3Q8N755 202 aa14.69□□□□□ -0.06
SYNE2-228ENST00000639659 CNTD1Q8N815 330 aa14.69□□□□□ -0.06
SYNE2-228ENST00000639659 FAM71BQ8TC56 605 aa14.69□□□□□ -0.06
SYNE2-228ENST00000639659 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.69□□□□□ -0.06
SYNE2-228ENST00000639659 FATE1Q969F0 183 aa14.69□□□□□ -0.06
SYNE2-228ENST00000639659 CHST8Q9H2A9 424 aa14.69□□□□□ -0.06
SYNE2-228ENST00000639659 CBX8Q9HC52 389 aa14.69□□□□□ -0.06
SYNE2-228ENST00000639659 MAGEE1Q9HCI5 957 aa14.69□□□□□ -0.06
SYNE2-228ENST00000639659 CTTNBP2NLQ9P2B4 639 aa14.69□□□□□ -0.06
SYNE2-228ENST00000639659 SNX7Q9UNH6 387 aa14.69□□□□□ -0.06
SYNE2-228ENST00000639659 PCDHGA9Q9Y5G4 932 aaKnown RBP14.69□□□□□ -0.06
SYNE2-228ENST00000639659 CACNA1DQ01668 2161 aa14.68□□□□□ -0.06
SYNE2-228ENST00000639659 MED13Q9UHV7 2174 aa14.68□□□□□ -0.06
SYNE2-228ENST00000639659 TLCD2A6NGC4 264 aa14.68□□□□□ -0.06
SYNE2-228ENST00000639659 OR2AG2A6NM03 316 aa14.68□□□□□ -0.06
SYNE2-228ENST00000639659 ENO4A6NNW6 628 aa14.68□□□□□ -0.06
SYNE2-228ENST00000639659 AURKAO14965 403 aa14.68□□□□□ -0.06
SYNE2-228ENST00000639659 GPR39O43194 453 aa14.68□□□□□ -0.06
SYNE2-228ENST00000639659 DPM1O60762 260 aa14.68□□□□□ -0.06
SYNE2-228ENST00000639659 PMPCBO75439 489 aa14.68□□□□□ -0.06
SYNE2-228ENST00000639659 RECKO95980 971 aa14.68□□□□□ -0.06
SYNE2-228ENST00000639659 CYP1A2P05177 515 aa14.68□□□□□ -0.06
SYNE2-228ENST00000639659 CDK18Q07002 472 aa14.68□□□□□ -0.06
SYNE2-228ENST00000639659 TMEM115Q12893 351 aaPredicted RBP14.68□□□□□ -0.06
SYNE2-228ENST00000639659 RPE65Q16518 533 aa14.68□□□□□ -0.06
SYNE2-228ENST00000639659 KYNUQ16719 465 aa14.68□□□□□ -0.06
SYNE2-228ENST00000639659 PRAMEF17Q5VTA0 474 aa14.68□□□□□ -0.06
SYNE2-228ENST00000639659 JMJD6Q6NYC1 403 aaPredicted RBP14.68□□□□□ -0.06
SYNE2-228ENST00000639659 WASH2PQ6VEQ5 465 aa14.68□□□□□ -0.06
SYNE2-228ENST00000639659 AMZ2Q86W34 360 aa14.68□□□□□ -0.06
SYNE2-228ENST00000639659 OOSP2Q86WS3 158 aa14.68□□□□□ -0.06
SYNE2-228ENST00000639659 ENDOVQ8N8Q3 282 aaKnown RBP14.68□□□□□ -0.06
SYNE2-228ENST00000639659 SPATA22Q8NHS9 363 aa14.68□□□□□ -0.06
SYNE2-228ENST00000639659 TRIB3Q96RU7 358 aa14.68□□□□□ -0.06
SYNE2-228ENST00000639659 NAT10Q9H0A0 1025 aaKnown RBP14.68□□□□□ -0.06
SYNE2-228ENST00000639659 CUEDC1Q9NWM3 386 aaPredicted RBP14.68□□□□□ -0.06
SYNE2-228ENST00000639659 UBP1Q9NZI7 540 aa14.68□□□□□ -0.06
SYNE2-228ENST00000639659 SPO11Q9Y5K1 396 aa14.68□□□□□ -0.06
SYNE2-228ENST00000639659 LRRD1A4D1F6 860 aa14.67□□□□□ -0.06
SYNE2-228ENST00000639659 F5H423 210 aaPredicted RBP14.67□□□□□ -0.06
SYNE2-228ENST00000639659 KRT86O43790 486 aa14.67□□□□□ -0.06
SYNE2-228ENST00000639659 POP7O75817 140 aaKnown RBP14.67□□□□□ -0.06
SYNE2-228ENST00000639659 TMEM63AO94886 807 aa14.67□□□□□ -0.06
SYNE2-228ENST00000639659 MT-CYBP00156 380 aaPredicted RBP14.67□□□□□ -0.06
SYNE2-228ENST00000639659 SERPINC1P01008 464 aa14.67□□□□□ -0.06
SYNE2-228ENST00000639659 KLK3P07288 261 aaPredicted RBP14.67□□□□□ -0.06
SYNE2-228ENST00000639659 IFI35P80217 286 aaPredicted RBP14.67□□□□□ -0.06
SYNE2-228ENST00000639659 HSD11B2P80365 405 aa14.67□□□□□ -0.06
SYNE2-228ENST00000639659 PPIDQ08752 370 aaKnown RBP14.67□□□□□ -0.06
SYNE2-228ENST00000639659 NFE2L1Q14494 772 aa14.67□□□□□ -0.06
SYNE2-228ENST00000639659 NOMO1Q15155 1222 aa14.67□□□□□ -0.06
SYNE2-228ENST00000639659 PPP2R5EQ16537 467 aa14.67□□□□□ -0.06
SYNE2-228ENST00000639659 TMTC4Q5T4D3 741 aa14.67□□□□□ -0.06
SYNE2-228ENST00000639659 NPNTQ6UXI9 565 aa14.67□□□□□ -0.06
SYNE2-228ENST00000639659 FAM151BQ6UXP7 276 aa14.67□□□□□ -0.06
SYNE2-228ENST00000639659 FAM83HQ6ZRV2 1179 aaPredicted RBP14.67□□□□□ -0.06
SYNE2-228ENST00000639659 DET1Q7L5Y6 550 aa14.67□□□□□ -0.06
SYNE2-228ENST00000639659 C11orf96Q7Z7L8 435 aa14.67□□□□□ -0.06
SYNE2-228ENST00000639659 FDCSPQ8NFU4 85 aa14.67□□□□□ -0.06
SYNE2-228ENST00000639659 CPLX3Q8WVH0 158 aa14.67□□□□□ -0.06
SYNE2-228ENST00000639659 CLIP3Q96DZ5 547 aa14.67□□□□□ -0.06
SYNE2-228ENST00000639659 IMP4Q96G21 291 aaKnown RBP14.67□□□□□ -0.06
SYNE2-228ENST00000639659 NAP1L5Q96NT1 182 aaPredicted RBP14.67□□□□□ -0.06
SYNE2-228ENST00000639659 FCRL4Q96PJ5 515 aa14.67□□□□□ -0.06
SYNE2-228ENST00000639659 NUDT9Q9BW91 350 aa14.67□□□□□ -0.06
SYNE2-228ENST00000639659 TLR10Q9BXR5 811 aa14.67□□□□□ -0.06
SYNE2-228ENST00000639659 RAB33BQ9H082 229 aa14.67□□□□□ -0.06
SYNE2-228ENST00000639659 KCND1Q9NSA2 647 aa14.67□□□□□ -0.06
SYNE2-228ENST00000639659 HRASLS2Q9NWW9 162 aa14.67□□□□□ -0.06
SYNE2-228ENST00000639659 NFKBIL1Q9UBC1 381 aaPredicted RBP14.67□□□□□ -0.06
SYNE2-228ENST00000639659 TMPRSS11EQ9UL52 423 aa14.67□□□□□ -0.06
SYNE2-228ENST00000639659 CREBBPQ92793 2442 aa14.67□□□□□ -0.06
SYNE2-228ENST00000639659 PRRC2CQ9Y520 2896 aaKnown RBP14.67□□□□□ -0.06
SYNE2-228ENST00000639659 A0A087X0T9 212 aa14.66□□□□□ -0.06
SYNE2-228ENST00000639659 OR6C74A6NCV1 312 aa14.66□□□□□ -0.06
SYNE2-228ENST00000639659 OR5K3A6NET4 321 aa14.66□□□□□ -0.06
SYNE2-228ENST00000639659 FAM228BP0C875 321 aa14.66□□□□□ -0.06
SYNE2-228ENST00000639659 AKT1P31749 480 aa14.66□□□□□ -0.06
SYNE2-228ENST00000639659 CTSCP53634 463 aa14.66□□□□□ -0.06
SYNE2-228ENST00000639659 DYNLT1P63172 113 aa14.66□□□□□ -0.06
SYNE2-228ENST00000639659 TUBB4BP68371 445 aa14.66□□□□□ -0.06
SYNE2-228ENST00000639659 TUBB2AQ13885 445 aa14.66□□□□□ -0.06
SYNE2-228ENST00000639659 NR6A1Q15406 480 aa14.66□□□□□ -0.06
SYNE2-228ENST00000639659 HGSNATQ68CP4 663 aa14.66□□□□□ -0.06
SYNE2-228ENST00000639659 SLC6A19Q695T7 634 aa14.66□□□□□ -0.06
SYNE2-228ENST00000639659 LCN10Q6JVE6 187 aa14.66□□□□□ -0.06
SYNE2-228ENST00000639659 TMEM220Q6QAJ8 160 aa14.66□□□□□ -0.06
SYNE2-228ENST00000639659 MAMDC2Q7Z304 686 aaPredicted RBP14.66□□□□□ -0.06
SYNE2-228ENST00000639659 BPHLQ86WA6 291 aaPredicted RBP14.66□□□□□ -0.06
SYNE2-228ENST00000639659 KMT5CQ86Y97 462 aa14.66□□□□□ -0.06
SYNE2-228ENST00000639659 RHOT1Q8IXI2 618 aa14.66□□□□□ -0.06
SYNE2-228ENST00000639659 NAT14Q8WUY8 206 aa14.66□□□□□ -0.06
SYNE2-228ENST00000639659 RAPGEF5Q92565 580 aa14.66□□□□□ -0.06
SYNE2-228ENST00000639659 C12orf66Q96MD2 445 aa14.66□□□□□ -0.06
SYNE2-228ENST00000639659 PPM1MQ96MI6 270 aa14.66□□□□□ -0.06
SYNE2-228ENST00000639659 VPS35Q96QK1 796 aa14.66□□□□□ -0.06
SYNE2-228ENST00000639659 TUBB2BQ9BVA1 445 aa14.66□□□□□ -0.06
SYNE2-228ENST00000639659 ZCCHC2Q9C0B9 1178 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms