RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 GPRIN3Q6ZVF9 776 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 USP49Q70CQ1 688 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 SLC51AQ86UW1 340 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 ISG20Q96AZ6 181 aaKnown RBP4.27□□□□□ -1.73
SCN3A-209ENST00000639244 TAAR1Q96RJ0 339 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 ERVK-6Q9BXR3 956 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 MROQ9BYG7 248 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 RNF146Q9NTX7 359 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 TREM2Q9NZC2 230 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 ERVK-18Q9QC07 812 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 GJD2Q9UKL4 321 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 TRAV34A0A0B4J273 112 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 C2orf92A0A1B0GVN3 265 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 USP17L15C9J2P7 530 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 USP17L12C9JPN9 530 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 USP17L11C9JVI0 530 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 USP17L21D6R901 530 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 USP17L18D6R9N7 530 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 USP17L22D6RA61 530 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 USP17L19D6RCP7 530 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 USP17L20D6RJB6 530 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 UBE2Q2LH0YL09 131 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 H7BY64 318 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 GYG2O15488 501 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 AP5Z1O43299 807 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 TBX1O43435 398 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 DDAH1O94760 285 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 ADAP00813 363 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 ADRB1P08588 477 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 YWHAQP27348 245 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 IL6STP40189 918 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-209ENST00000639244 BTDP43251 543 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 HSF2Q03933 536 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 USP17L24Q0WX57 530 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 ZCCHC12Q6PEW1 402 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 CYB5R4Q7L1T6 521 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 APOL4Q9BPW4 351 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 DUSP26Q9BV47 211 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 PCDHA1Q9Y5I3 950 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 UHRF1BP1Q6BDS2 1440 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 WDR64B1ANS9 1081 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 PTGES3LE9PB15 166 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 NEDD8-MDP1E9PL57 170 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 GABRDO14764 452 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 PJA2O43164 708 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 PRF1P14222 555 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 C4BPBP20851 252 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 MAGEB1P43366 347 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 RGS6P49758 472 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 BTN1A1Q13410 526 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 HKDC1Q2TB90 917 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 CACUL1Q86Y37 369 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 ZBTB8OSQ8IWT0 167 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 C16orf71Q8IYS4 520 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-209ENST00000639244 CA5BP1Q8WTZ4 195 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 MRPL48Q96GC5 212 aaKnown RBP4.27□□□□□ -1.73
SCN3A-209ENST00000639244 MASTLQ96GX5 879 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 MYRFLQ96LU7 910 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 C5orf34Q96MH7 638 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 RIPOR3Q96MK2 946 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 MCOLN1Q9GZU1 580 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 NMUR1Q9HB89 426 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 NMRK2Q9NPI5 230 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 MCUBQ9NWR8 336 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 STXBP5LQ9Y2K9 1186 aa4.27□□□□□ -1.73
SCN3A-209ENST00000639244 KIAA0100Q14667 2235 aaKnown RBP4.27□□□□□ -1.73
SCN3A-209ENST00000639244 CNTNAP2Q9UHC6 1331 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 A0A0U1RQV5 110 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 ARHGEF33A8MVX0 844 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 TRIM13O60858 407 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 CNPP09543 421 aaKnown RBP4.26□□□□□ -1.73
SCN3A-209ENST00000639244 PTPN4P29074 926 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 ADD1P35611 737 aaKnown RBP4.26□□□□□ -1.73
SCN3A-209ENST00000639244 EIF2DP41214 584 aaKnown RBP4.26□□□□□ -1.73
SCN3A-209ENST00000639244 TMPOP42166 694 aaKnown RBP4.26□□□□□ -1.73
SCN3A-209ENST00000639244 SLC12A1Q13621 1099 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 PDK4Q16654 411 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 RBM43Q6ZSC3 357 aaKnown RBP4.26□□□□□ -1.73
SCN3A-209ENST00000639244 CLIP4Q8N3C7 705 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 ACTRT2Q8TDY3 377 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 SNX33Q8WV41 574 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 ELMO1Q92556 727 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 AP3S1Q92572 193 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 ZNF558Q96NG5 402 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 MGME1Q9BQP7 344 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 ZNF559Q9BR84 538 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 DCUN1D5Q9BTE7 237 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 RBCK1Q9BYM8 510 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 CLEC4MQ9H2X3 399 aaPredicted RBP4.26□□□□□ -1.73
SCN3A-209ENST00000639244 AGO1Q9UL18 857 aaKnown RBP4.26□□□□□ -1.73
SCN3A-209ENST00000639244 SSR3Q9UNL2 185 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 RGS12O14924 1447 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 MARCH11A6NNE9 402 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 F5H0A9 414 aaPredicted RBP4.26□□□□□ -1.73
SCN3A-209ENST00000639244 SLC16A6O15403 523 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 ADAM12O43184 909 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 IFNA7P01567 189 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 IL12AP29459 219 aa4.26□□□□□ -1.73
SCN3A-209ENST00000639244 ATP5C1P36542 298 aaKnown RBP4.26□□□□□ -1.73
SCN3A-209ENST00000639244 ZNF81P51508 661 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms