RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 RPLP0P05388 317 aaKnown RBP18.3■□□□□ 0.52
SCARB2-213ENST00000638680 ALG11Q2TAA5 492 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 MPPE1Q53F39 396 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 INTS6LQ5JSJ4 861 aaKnown RBP18.3■□□□□ 0.52
SCARB2-213ENST00000638680 ZDHHC21Q8IVQ6 265 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 AP2M1Q96CW1 435 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 CEP295NLQ96MC4 621 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 ATG10Q9H0Y0 220 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 PCP4L1A6NKN8 68 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 ITM2AO43736 263 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 MNDAP41218 407 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 USP41Q3LFD5 358 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.3■□□□□ 0.52
SCARB2-213ENST00000638680 CCDC36Q8IYA8 594 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 ZNF558Q96NG5 402 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 TRIM17Q9Y577 477 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 TLL2Q9Y6L7 1015 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 ADAMDEC1O15204 470 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 MATN3O15232 486 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 SLC22A2O15244 555 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 CCNB2O95067 398 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 TOP3BO95985 862 aaKnown RBP18.3■□□□□ 0.52
SCARB2-213ENST00000638680 TTLL2Q9BWV7 592 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 SLC25A51Q9H1U9 297 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 PDZD7Q9H5P4 517 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 SLC17A6Q9P2U8 582 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 FZD10Q9ULW2 581 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 MCIDASD6RGH6 385 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 OR4Q2P0C623 313 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 MTHFD1P11586 935 aaKnown RBP18.3■□□□□ 0.52
SCARB2-213ENST00000638680 MERTKQ12866 999 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 TAF10Q12962 218 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 IKBKEQ14164 716 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 ASTE1Q2TB18 679 aaPredicted RBP18.3■□□□□ 0.52
SCARB2-213ENST00000638680 NADK2Q4G0N4 442 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 BEND5Q7L4P6 421 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 C11orf65Q8NCR3 313 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 PCDH19Q8TAB3 1148 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 SUN5Q8TC36 379 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 ADAMTS15Q8TE58 950 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 KBTBD7Q8WVZ9 684 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 ZNF570Q96NI8 536 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 ST6GALNAC4Q9H4F1 302 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 EBF2Q9HAK2 575 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 MIOSQ9NXC5 875 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 GMEB1Q9Y692 573 aa18.3■□□□□ 0.52
SCARB2-213ENST00000638680 RHOQP17081 205 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 RPIAP49247 311 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 E2F2Q14209 437 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 UNC5BQ8IZJ1 945 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 EI24O14681 340 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 SCN2BO60939 215 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 RAP2AP10114 183 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 SAGP10523 405 aaPredicted RBP18.29■□□□□ 0.52
SCARB2-213ENST00000638680 FMO3P31513 532 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 ARL2P36404 184 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 PCDH1Q08174 1060 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 DEFB132Q7Z7B7 95 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 KIAA1522Q9P206 1035 aaPredicted RBP18.29■□□□□ 0.52
SCARB2-213ENST00000638680 UNGP13051 313 aaPredicted RBP18.29■□□□□ 0.52
SCARB2-213ENST00000638680 RFTN2Q52LD8 501 aaPredicted RBP18.29■□□□□ 0.52
SCARB2-213ENST00000638680 TCEAL5Q5H9L2 206 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 ZNF697Q5TEC3 545 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 LAPTM4BQ86VI4 370 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 DQX1Q8TE96 717 aaKnown RBP18.29■□□□□ 0.52
SCARB2-213ENST00000638680 DCAKDQ8WVC6 231 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 NEK6Q9HC98 313 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 CLK3P49761 638 aaKnown RBP18.29■□□□□ 0.52
SCARB2-213ENST00000638680 HSDL1Q3SXM5 330 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 USP43Q70EL4 1123 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 MPP5Q8N3R9 675 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 OR10G6Q8NH81 332 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 EIF2B3Q9NR50 452 aaKnown RBP18.29■□□□□ 0.52
SCARB2-213ENST00000638680 HECAQ9UBI9 543 aaPredicted RBP18.29■□□□□ 0.52
SCARB2-213ENST00000638680 TRPS1Q9UHF7 1281 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 TBX1O43435 398 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 SPAM1P38567 509 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 SMCO1Q147U7 214 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 ZNF248Q8NDW4 579 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 HMCESQ96FZ2 354 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 IGFLR1Q9H665 355 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 DNAJB4Q9UDY4 337 aa18.29■□□□□ 0.52
SCARB2-213ENST00000638680 ATP6V1G1O75348 118 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 SNX4O95219 450 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 S100A6P06703 90 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 SLC7A1P30825 629 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 NAE1Q13564 534 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 STX12Q86Y82 276 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 MOV10Q9HCE1 1003 aaKnown RBP18.28■□□□□ 0.52
SCARB2-213ENST00000638680 EVLQ9UI08 416 aaPredicted RBP18.28■□□□□ 0.52
SCARB2-213ENST00000638680 PPM1HQ9ULR3 514 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 SLC1A2P43004 574 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 ARFIP1P53367 373 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 AIF1LQ9BQI0 150 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 MAGEB17A8MXT2 336 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 EFCAB9A8MZ26 197 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 SH3PXD2AQ5TCZ1 1133 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 ZDHHC20Q5W0Z9 365 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 TMEM198Q66K66 360 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 USP30Q70CQ3 517 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms