RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 DGKAP23743 735 aa21.21■□□□□ 0.99
CLN6-224ENST00000638076 MAP7D1Q3KQU3 841 aa21.21■□□□□ 0.99
CLN6-224ENST00000638076 GPR33Q49SQ1 333 aa21.21■□□□□ 0.99
CLN6-224ENST00000638076 RIN3Q8TB24 985 aa21.21■□□□□ 0.99
CLN6-224ENST00000638076 HOPXQ9BPY8 73 aaPredicted RBP21.21■□□□□ 0.99
CLN6-224ENST00000638076 KIAA0355O15063 1070 aa21.21■□□□□ 0.99
CLN6-224ENST00000638076 RNASEH2AO75792 299 aaKnown RBP21.21■□□□□ 0.99
CLN6-224ENST00000638076 LRRC66Q68CR7 880 aa21.21■□□□□ 0.99
CLN6-224ENST00000638076 CYP2R1Q6VVX0 501 aa21.21■□□□□ 0.99
CLN6-224ENST00000638076 TPRG1Q6ZUI0 275 aa21.21■□□□□ 0.99
CLN6-224ENST00000638076 TMEM25Q86YD3 366 aa21.21■□□□□ 0.99
CLN6-224ENST00000638076 NXPE1Q8N323 547 aa21.21■□□□□ 0.99
CLN6-224ENST00000638076 ZBTB2Q8N680 514 aa21.21■□□□□ 0.99
CLN6-224ENST00000638076 PDPRQ8NCN5 879 aa21.21■□□□□ 0.99
CLN6-224ENST00000638076 TCEAL4Q96EI5 215 aa21.21■□□□□ 0.99
CLN6-224ENST00000638076 ASIC4Q96FT7 647 aa21.21■□□□□ 0.99
CLN6-224ENST00000638076 TEX37Q96LM6 180 aa21.21■□□□□ 0.99
CLN6-224ENST00000638076 TCF25Q9BQ70 676 aa21.21■□□□□ 0.99
CLN6-224ENST00000638076 HTATIP2Q9BUP3 242 aa21.21■□□□□ 0.99
CLN6-224ENST00000638076 C1orf50Q9BV19 199 aa21.21■□□□□ 0.99
CLN6-224ENST00000638076 SUV39H2Q9H5I1 410 aa21.21■□□□□ 0.99
CLN6-224ENST00000638076 NSUN3Q9H649 340 aaKnown RBP21.21■□□□□ 0.99
CLN6-224ENST00000638076 SLC52A3Q9NQ40 469 aa21.21■□□□□ 0.99
CLN6-224ENST00000638076 GMPR2Q9P2T1 348 aaKnown RBP21.21■□□□□ 0.99
CLN6-224ENST00000638076 PTPRSQ13332 1948 aa21.2■□□□□ 0.99
CLN6-224ENST00000638076 GLUD1P00367 558 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 LINGO3P0C6S8 592 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 ZCCHC18P0CG32 403 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 IRX1P78414 480 aaPredicted RBP21.2■□□□□ 0.98
CLN6-224ENST00000638076 RHDQ02161 417 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 GTF2H2Q13888 395 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 ASTLQ6HA08 431 aaPredicted RBP21.2■□□□□ 0.98
CLN6-224ENST00000638076 GTF2H2CQ6P1K8 395 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 MACC1Q6ZN28 852 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 ISG20Q96AZ6 181 aaKnown RBP21.2■□□□□ 0.98
CLN6-224ENST00000638076 SCRN2Q96FV2 425 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 BTBD9Q96Q07 612 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 APOL5Q9BWW9 433 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 FAM126AQ9BYI3 521 aaPredicted RBP21.2■□□□□ 0.98
CLN6-224ENST00000638076 ZDHHC6Q9H6R6 413 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 RIC8BQ9NVN3 520 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 NME4O00746 187 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 OR7A17O14581 309 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 CAPN1P07384 714 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 PFKLP17858 780 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 ERVFC1P60507 584 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 ERVK-8P63133 956 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 GPRC6AQ5T6X5 926 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 OR52E8Q6IFG1 317 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 MINDY1Q8N5J2 469 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 METTL6Q8TCB7 284 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 ECHDC3Q96DC8 303 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 TUBGCP5Q96RT8 1024 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 CCT7Q99832 543 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 OARD1Q9Y530 152 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 AP4S1Q9Y587 144 aa21.2■□□□□ 0.98
CLN6-224ENST00000638076 HIDE1A8MVS5 230 aa21.19■□□□□ 0.98
CLN6-224ENST00000638076 NEDD8-MDP1E9PL57 170 aa21.19■□□□□ 0.98
CLN6-224ENST00000638076 FXYD1O00168 92 aa21.19■□□□□ 0.98
CLN6-224ENST00000638076 TXNDC9O14530 226 aa21.19■□□□□ 0.98
CLN6-224ENST00000638076 GRM6O15303 877 aa21.19■□□□□ 0.98
CLN6-224ENST00000638076 MRPL19P49406 292 aaKnown RBP21.19■□□□□ 0.98
CLN6-224ENST00000638076 CCNHP51946 323 aaPredicted RBP21.19■□□□□ 0.98
CLN6-224ENST00000638076 FOLH1Q04609 750 aa21.19■□□□□ 0.98
CLN6-224ENST00000638076 CAPRIN1Q14444 709 aaKnown RBP21.19■□□□□ 0.98
CLN6-224ENST00000638076 Q6ZSR9 355 aa21.19■□□□□ 0.98
CLN6-224ENST00000638076 USP45Q70EL2 814 aa21.19■□□□□ 0.98
CLN6-224ENST00000638076 FNDC5Q8NAU1 212 aa21.19■□□□□ 0.98
CLN6-224ENST00000638076 ADCY4Q8NFM4 1077 aa21.19■□□□□ 0.98
CLN6-224ENST00000638076 OR4F6Q8NGB9 312 aa21.19■□□□□ 0.98
CLN6-224ENST00000638076 EMILIN2Q9BXX0 1053 aa21.19■□□□□ 0.98
CLN6-224ENST00000638076 BRINP2Q9C0B6 783 aa21.19■□□□□ 0.98
CLN6-224ENST00000638076 GID8Q9NWU2 228 aa21.19■□□□□ 0.98
CLN6-224ENST00000638076 ELOVL2Q9NXB9 296 aa21.19■□□□□ 0.98
CLN6-224ENST00000638076 ABCD2Q9UBJ2 740 aa21.19■□□□□ 0.98
CLN6-224ENST00000638076 SLC25A13Q9UJS0 675 aa21.19■□□□□ 0.98
CLN6-224ENST00000638076 PTBP2Q9UKA9 531 aaKnown RBP21.19■□□□□ 0.98
CLN6-224ENST00000638076 ST14Q9Y5Y6 855 aa21.19■□□□□ 0.98
CLN6-224ENST00000638076 SLC4A7Q9Y6M7 1214 aa21.19■□□□□ 0.98
CLN6-224ENST00000638076 ZNF106Q9H2Y7 1883 aaKnown RBP21.19■□□□□ 0.98
CLN6-224ENST00000638076 DOCK6Q96HP0 2047 aa21.19■□□□□ 0.98
CLN6-224ENST00000638076 CXorf51AA0A1B0GTR3 108 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 HSPA7P48741 367 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 KCNK10P57789 538 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 UFM1P61960 85 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 HTRA4P83105 476 aaPredicted RBP21.18■□□□□ 0.98
CLN6-224ENST00000638076 PTSQ03393 145 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 GRIK2Q13002 908 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 PHKG1Q16816 387 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 COQ5Q5HYK3 327 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 C6orf136Q5SQH8 315 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 PRMT9Q6P2P2 845 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 DPY19L3Q6ZPD9 716 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 DHFR2Q86XF0 187 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 TICAM1Q8IUC6 712 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 ADGRG2Q8IZP9 1017 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 TMEM102Q8N9M5 508 aaPredicted RBP21.18■□□□□ 0.98
CLN6-224ENST00000638076 CATSPER1Q8NEC5 780 aa21.18■□□□□ 0.98
CLN6-224ENST00000638076 CLP1Q92989 425 aaKnown RBP21.18■□□□□ 0.98
CLN6-224ENST00000638076 VPS33AQ96AX1 596 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms