RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 CTSL3PQ5NE16 218 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 HACD2Q6Y1H2 254 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 ANKRD46Q86W74 232 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 ZC3H7AQ8IWR0 971 aaKnown RBP13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 GFM2Q969S9 779 aaKnown RBP13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 TMBIM1Q969X1 311 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 ZUFSPQ96AP4 578 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 EGFL8Q99944 293 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 TIMMDC1Q9NPL8 285 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 GNGT2O14610 69 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 ADAM12O43184 909 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 VPS26AO75436 327 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 RASAL1O95294 804 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 MATN1P21941 496 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 MYF6P23409 242 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 CAPGP40121 348 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 FLT3LGP49771 235 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 BNIP2Q12982 314 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 ZBED5Q49AG3 693 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 TMEM199Q8N511 208 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 KRTCAP2Q8N6L1 136 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 NCLNQ969V3 563 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 IKZF5Q9H5V7 419 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 TLR9Q9NR96 1032 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 LIMD1Q9UGP4 676 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 LCHNA4D1U4 455 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 WASH4PA8MWX3 477 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 K7ERQ8 282 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 ARVCFO00192 962 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 UGT1A1P22309 533 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 UGT1A4P22310 534 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 UGT1A3P35503 534 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 UGT1A5P35504 534 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 ZNF140P52738 457 aaPredicted RBP13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 CRHR2Q13324 411 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 BFSP2Q13515 415 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 NFE2Q16621 373 aaPredicted RBP13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 PARP15Q460N3 678 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 TMTC4Q5T4D3 741 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 ELMSAN1Q6PJG2 1045 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 FAM43BQ6ZT52 329 aaPredicted RBP13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 OR4F6Q8NGB9 312 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 ITFG1Q8TB96 612 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 DERL2Q9GZP9 239 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 ARMC7Q9H6L4 198 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 HACD3Q9P035 362 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 VAPAQ9P0L0 249 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 LEF1Q9UJU2 399 aaPredicted RBP13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 AGO1Q9UL18 857 aaKnown RBP13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 INVSQ9Y283 1065 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 FCF1Q9Y324 198 aaKnown RBP13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 MYO16Q9Y6X6 1858 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 A0A1W2PQ67 120 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 GSTA4O15217 222 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 SH3BGRLO75368 114 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 TSPAN12O95859 305 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 PENKP01210 267 aaPredicted RBP13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 RPS17P08708 135 aaKnown RBP13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 MAP4P27816 1152 aaKnown RBP13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 LSM3P62310 102 aaKnown RBP13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 PRKG2Q13237 762 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 DSC3Q14574 896 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 RTP2Q5QGT7 225 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 BORAQ6PGQ7 559 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 GALNT10Q86SR1 603 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 SNX29P2Q8IUI4 249 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 OR56A4Q8NGH8 313 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 RHEBL1Q8TAI7 183 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 HM13Q8TCT9 377 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 CD200R1Q8TD46 325 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 GIPC3Q8TF64 312 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 SEZ6LQ9BYH1 1024 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 PADI4Q9UM07 663 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 VPS4AQ9UN37 437 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 TDRD15B5MCY1 1934 aaKnown RBP13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 TCRBV5S2A0A599 114 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 E2F3O00716 465 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 INSIG1O15503 277 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 UROSP10746 265 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 MTHFRP42898 656 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 ATP4BP51164 291 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 MBTPS1Q14703 1052 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 MEP1AQ16819 746 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 ARMC12Q5T9G4 340 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 INTS11Q5TA45 600 aaKnown RBP13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 PRMT9Q6P2P2 845 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 SPESP1Q6UW49 350 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 GCNT7Q6ZNI0 430 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 OSBPL6Q9BZF3 934 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 PKD2L2Q9NZM6 624 aa13.85□□□□□ -0.19
CACNA1A-228ENST00000636610 DOCK4Q8N1I0 1966 aa13.84□□□□□ -0.19
CACNA1A-228ENST00000636610 C1orf232A0A0U1RR37 186 aa13.84□□□□□ -0.19
CACNA1A-228ENST00000636610 TOR1BO14657 336 aa13.84□□□□□ -0.19
CACNA1A-228ENST00000636610 XYLBO75191 536 aa13.84□□□□□ -0.19
CACNA1A-228ENST00000636610 BMP10O95393 424 aa13.84□□□□□ -0.19
CACNA1A-228ENST00000636610 MATN4O95460 622 aa13.84□□□□□ -0.19
CACNA1A-228ENST00000636610 C1QCP02747 245 aa13.84□□□□□ -0.19
CACNA1A-228ENST00000636610 KLKB1P03952 638 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms