RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 PMP22Q01453 160 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 TMEM115Q12893 351 aaPredicted RBP1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 ZNF155Q12901 538 aaPredicted RBP1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 DLG1Q12959 904 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 IDI1Q13907 227 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 PDE1CQ14123 709 aaPredicted RBP1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 FGFBP1Q14512 234 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 KRT32Q14532 448 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 RNPS1Q15287 305 aaKnown RBP1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 MED22Q15528 200 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 TBCEQ15813 527 aaPredicted RBP1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 CCNG2Q16589 344 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 BAK1Q16611 211 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 TSTQ16762 297 aaKnown RBP1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 C2orf68Q2NKX9 166 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 TMEM95Q3KNT9 176 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 DPCR1Q3MIW9 517 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 AMZ1Q400G9 498 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 TMEM35AQ53FP2 167 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 DCST1Q5T197 706 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 PDSS1Q5T2R2 415 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 HIST2H2BDQ6DRA6 164 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 FAAH2Q6GMR7 532 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 TTI2Q6NXR4 508 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 CDC73Q6P1J9 531 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 KCTD18Q6PI47 426 aaPredicted RBP1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 ZNF497Q6ZNH5 498 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 CCDC129Q6ZRS4 1044 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 SMIM5Q71RC9 77 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 RSRC2Q7L4I2 434 aaKnown RBP1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 LINGO2Q7L985 606 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 SLC26A9Q7LBE3 791 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 MAATS1Q7Z4T9 603 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 CCDC190Q86UF4 302 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 CERS3Q8IU89 383 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 ODF3L1Q8IXM7 274 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 DIS3L2Q8IYB7 885 aaKnown RBP1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 TEX11Q8IYF3 940 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 LYG1Q8N1E2 194 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 TMTC2Q8N394 836 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 SPATA6LQ8N4H0 392 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 NEXN-AS1Q8NBZ9 246 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 NAXEQ8NCW5 288 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 DMBX1Q8NFW5 382 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 OR13A1Q8NGR1 328 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 OR8K5Q8NH50 307 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 HMGCLL1Q8TB92 370 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 ETNPPLQ8TBG4 499 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 METTL6Q8TCB7 284 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 DNAAF4Q8WXU2 420 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 SORCS1Q8WY21 1168 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 FIG4Q92562 907 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 TANKQ92844 425 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 CDCA5Q96FF9 252 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 BICD1Q96G01 975 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 FEM1CQ96JP0 617 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 TBATAQ96M53 351 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 TMEM68Q96MH6 324 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 ZNF583Q96ND8 569 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 ZNF385AQ96PM9 386 aaKnown RBP1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 PIP5K1AQ99755 562 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 SEMA3CQ99985 751 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 TKTL2Q9H0I9 626 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 LRMDAQ9H2I8 198 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 RANBP17Q9H2T7 1088 aaKnown RBP1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 ZHX3Q9H4I2 956 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 SH2D4AQ9H788 454 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 C17orf75Q9HAS0 396 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 FBRSL1Q9HCM7 1045 aaKnown RBP1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 UBN1Q9NPG3 1134 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 HINT3Q9NQE9 182 aaKnown RBP1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 DDX4Q9NQI0 724 aaKnown RBP1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 EIF2B3Q9NR50 452 aaKnown RBP1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 OLA1Q9NTK5 396 aaKnown RBP1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 INTS10Q9NVR2 710 aaKnown RBP1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 TAAR2Q9P1P5 351 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 ORC3Q9UBD5 711 aaPredicted RBP1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 SLC25A10Q9UBX3 287 aaPredicted RBP1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 HSPB7Q9UBY9 170 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 AASSQ9UDR5 926 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 CNOT8Q9UFF9 292 aaKnown RBP1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 OR14J1Q9UGF5 321 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 LIMA1Q9UHB6 759 aaKnown RBP1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 SIX4Q9UIU6 781 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 PSAT1Q9Y617 370 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 CEPT1Q9Y6K0 416 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 STON1Q9Y6Q2 735 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 SCINQ9Y6U3 715 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 MAU2Q9Y6X3 613 aa1.09□□□□□ -2.23
SMARCB1-209ENST00000635578 UTYO14607 1347 aa1.09□□□□□ -2.24
SMARCB1-209ENST00000635578 PDS5AQ29RF7 1337 aaKnown RBP1.09□□□□□ -2.24
SMARCB1-209ENST00000635578 MYH7BA7E2Y1 1941 aa1.09□□□□□ -2.24
SMARCB1-209ENST00000635578 KIAA1217Q5T5P2 1943 aa1.09□□□□□ -2.24
SMARCB1-209ENST00000635578 PDE4DIPQ5VU43 2346 aa1.09□□□□□ -2.24
SMARCB1-209ENST00000635578 NSD2O96028 1365 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 CARMIL3Q8ND23 1372 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 PATJQ8NI35 1801 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 USP6P35125 1406 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 ANKARQ7Z5J8 1434 aa1.08□□□□□ -2.24
SMARCB1-209ENST00000635578 ANK1P16157 1881 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms