RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 LMLNQ96KR4 655 aa4.84□□□□□ -1.64
LINC00550-201ENST00000629293 CCDC114Q96M63 670 aa4.84□□□□□ -1.64
LINC00550-201ENST00000629293 SELENOSQ9BQE4 189 aa4.84□□□□□ -1.64
LINC00550-201ENST00000629293 ZDHHC6Q9H6R6 413 aa4.84□□□□□ -1.64
LINC00550-201ENST00000629293 DMTF1Q9Y222 760 aa4.84□□□□□ -1.64
LINC00550-201ENST00000629293 ITM2BQ9Y287 266 aa4.84□□□□□ -1.64
LINC00550-201ENST00000629293 ACTL7AQ9Y615 435 aa4.84□□□□□ -1.64
LINC00550-201ENST00000629293 CAPN7Q9Y6W3 813 aa4.84□□□□□ -1.64
LINC00550-201ENST00000629293 PLXNA2O75051 1894 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 E9PAM4 449 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 GOLGA8SH3BPF8 625 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 RNF103O00237 685 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 LEFTY1O75610 366 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 RASSF9O75901 435 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 TNFSF15O95150 251 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 ACSL3O95573 720 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 SRCP12931 536 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 HGFP14210 728 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 OR1E1P30953 314 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 ACADSBP45954 432 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 TAS2R38P59533 333 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 GPR85P60893 370 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 PPARDQ03181 441 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 OVGP1Q12889 678 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 TGIF1Q15583 401 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 OASLQ15646 514 aaKnown RBP4.83□□□□□ -1.64
LINC00550-201ENST00000629293 ALFQ53S48 1182 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 LCE2CQ5TA81 110 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 LETMD1Q6P1Q0 360 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 TAOK1Q7L7X3 1001 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 CCDC25Q86WR0 208 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 LRRC34Q8IZ02 419 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 RCOR2Q8IZ40 523 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 DTWD1Q8N5C7 304 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 UHMK1Q8TAS1 419 aaKnown RBP4.83□□□□□ -1.64
LINC00550-201ENST00000629293 RBM41Q96IZ5 413 aaKnown RBP4.83□□□□□ -1.64
LINC00550-201ENST00000629293 ZFYVE21Q9BQ24 234 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 HEMGNQ9BXL5 484 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 INTS9Q9NV88 658 aaKnown RBP4.83□□□□□ -1.64
LINC00550-201ENST00000629293 VPS51Q9UID3 782 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 FBXL7Q9UJT9 491 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 ANAPC5Q9UJX4 755 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 PNMA8BQ9ULN7 279 aaPredicted RBP4.83□□□□□ -1.64
LINC00550-201ENST00000629293 UBR5O95071 2799 aaPredicted RBP4.83□□□□□ -1.64
LINC00550-201ENST00000629293 hCG_1818297A0A087WSY0 165 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 IGLON5A6NGN9 336 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 C3orf70A6NLC5 250 aaPredicted RBP4.83□□□□□ -1.64
LINC00550-201ENST00000629293 RAD51BO15315 384 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 PRAMEF1O95521 474 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 SLC2A3P11169 496 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 ACP1P24666 158 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 ILKQ13418 452 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 TAZQ16635 292 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 TMEM95Q3KNT9 176 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 ATP13A4Q4VNC1 1196 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 INO80DQ53TQ3 878 aaPredicted RBP4.83□□□□□ -1.64
LINC00550-201ENST00000629293 PIP5KL1Q5T9C9 394 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 IZUMO3Q5VZ72 239 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 RWDD4Q6NW29 188 aaKnown RBP4.83□□□□□ -1.64
LINC00550-201ENST00000629293 PCSK4Q6UW60 755 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 MFSD7Q6UXD7 560 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 SPOCD1Q6ZMY3 1216 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 CCDC121Q6ZUS5 278 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 ERN2Q76MJ5 926 aaKnown RBP4.83□□□□□ -1.64
LINC00550-201ENST00000629293 CCDC50Q8IVM0 306 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 SLC22A18ASQ8N1D0 253 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 ZNF548Q8NEK5 533 aaPredicted RBP4.83□□□□□ -1.64
LINC00550-201ENST00000629293 OR2A12Q8NGT7 310 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.83□□□□□ -1.64
LINC00550-201ENST00000629293 CCHCR1Q8TD31 782 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 CABS1Q96KC9 395 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 PWWP2AQ96N64 755 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 CPXM1Q96SM3 734 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 PRMT1Q99873 361 aaKnown RBP4.83□□□□□ -1.64
LINC00550-201ENST00000629293 TKTL2Q9H0I9 626 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 TCEAL2Q9H3H9 227 aaPredicted RBP4.83□□□□□ -1.64
LINC00550-201ENST00000629293 CLMPQ9H6B4 373 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 WDCPQ9H6R7 721 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 ERVMER34-1Q9H9K5 563 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 GPR27Q9NS67 375 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 KLHL11Q9NVR0 708 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 CTNNAL1Q9UBT7 734 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 MOSPD1Q9UJG1 213 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 HS3ST4Q9Y661 456 aa4.83□□□□□ -1.64
LINC00550-201ENST00000629293 AQP7O14520 342 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 DNALI1O14645 258 aaPredicted RBP4.82□□□□□ -1.64
LINC00550-201ENST00000629293 MED7O43513 233 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 PRNPP04156 253 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 PF4V1P10720 104 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 CREB1P16220 341 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 GCAP28676 217 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 ATP5DP30049 168 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 HNRNPH1P31943 449 aaKnown RBP4.82□□□□□ -1.64
LINC00550-201ENST00000629293 ADCY8P40145 1251 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 CDKN2BP42772 138 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 SULT1E1P49888 294 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 SCNN1BP51168 640 aa4.82□□□□□ -1.64
LINC00550-201ENST00000629293 DUSP3P51452 185 aaPredicted RBP4.82□□□□□ -1.64
LINC00550-201ENST00000629293 SLC25A11Q02978 314 aaKnown RBP4.82□□□□□ -1.64
LINC00550-201ENST00000629293 CCDC15Q0P6D6 951 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms