RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 TECRLQ5HYJ1 363 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 AGAP9Q5VTM2 703 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 LYPLAL1Q5VWZ2 237 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 ERAP2Q6P179 960 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 KLC3Q6P597 504 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 C6orf89Q6UWU4 347 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 TMEM92Q6UXU6 159 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 DPPA4Q7L190 304 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 SERPINA9Q86WD7 417 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 PPP1R14CQ8TAE6 165 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 PIP4K2CQ8TBX8 421 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 SREK1Q8WXA9 508 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 PTERQ96BW5 349 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 MOCOSQ96EN8 888 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 PPP1R16AQ96I34 528 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 SCYL1Q96KG9 808 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 PLEKHG4BQ96PX9 1271 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 POPDC3Q9HBV1 291 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 DYRK4Q9NR20 520 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 TAS2R13Q9NYV9 303 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 XPR1Q9UBH6 696 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 CRLS1Q9UJA2 301 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 IKZF3Q9UKT9 509 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 COMMD10Q9Y6G5 202 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 OAS3Q9Y6K5 1087 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 PRSS21Q9Y6M0 314 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 CHD6Q8TD26 2715 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 ABCA7Q8IZY2 2146 aa9.39□□□□□ -0.91
PDLIM5-223ENST00000627587 IGLV3-16A0A075B6K0 115 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 IQCF5A8MTL0 148 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 C1QTNF3-AMACRE9PGA6 284 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 PRMT5O14744 637 aaPredicted RBP9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 AREL1O15033 823 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 NPC1O15118 1278 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 ITM2AO43736 263 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 TSPAN12O95859 305 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 ESR1P03372 595 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 PYGLP06737 847 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 LTA4HP09960 611 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 PKMP14618 531 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 CPA3P15088 417 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 ZNF7P17097 686 aaPredicted RBP9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 CD9P21926 228 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 ITGB7P26010 798 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 ACRV1P26436 265 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 ATXN3P54252 364 aaPredicted RBP9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 DMTNQ08495 405 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 OVGP1Q12889 678 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 NUMA1Q14980 2115 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 MAP7D1Q3KQU3 841 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 PEAR1Q5VY43 1037 aaPredicted RBP9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 LYSMD4Q5XG99 296 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 SDE2Q6IQ49 451 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 PAQR3Q6TCH7 311 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 ZYG11AQ6WRX3 759 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 LIPIQ6XZB0 460 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 Q6ZVL8 140 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 TECPR1Q7Z6L1 1165 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 ISCA2Q86U28 154 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 CHPFQ8IZ52 775 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 CACNA2D3Q8IZS8 1091 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 NXPE1Q8N323 547 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 PGBD3Q8N328 593 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 HDDC3Q8N4P3 179 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 RDH11Q8TC12 318 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 ZNF398Q8TD17 642 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 LKAAEAR1Q8TD35 194 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 CD200R1Q8TD46 325 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 SCAMP4Q969E2 229 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 GPR21Q99679 349 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 TSSK1BQ9BXA7 367 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 CD84Q9UIB8 345 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 PCDHB1Q9Y5F3 818 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 STON1Q9Y6Q2 735 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 TRPM6Q9BX84 2022 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 PATE3B3GLJ2 98 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 E5RI56 91 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 EBAG9O00559 213 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 ZBTB14O43829 449 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 DLX3O60479 287 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 ZNF217O75362 1048 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 VPS26AO75436 327 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 LYPLA1O75608 230 aaPredicted RBP9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 MYL2P10916 166 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 CD1DP15813 335 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 ENGP17813 658 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 ETV3P41162 512 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 WASP42768 502 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 CLCN7P51798 805 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 ITGA9Q13797 1035 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 HENMT1Q5T8I9 393 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 FBXL19Q6PCT2 694 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 SPATA21Q7Z572 469 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 PIP4P1Q86T03 277 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 MMAAQ8IVH4 418 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 TMEFF1Q8IYR6 380 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 RBFAQ8N0V3 343 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 PELI3Q8N2H9 469 aa9.38□□□□□ -0.91
PDLIM5-223ENST00000627587 CLDN19Q8N6F1 224 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms