RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 KCNK1O00180 336 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 SKILP12757 684 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 ITGA1P56199 1179 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 TUBB4BP68371 445 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 KLHL30Q0D2K2 578 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 TUBB2AQ13885 445 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 DPYSL3Q14195 570 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 ELOAQ14241 798 aaKnown RBP14.36□□□□□ -0.11
PNKP-218ENST00000625299 PRAMEF17Q5VTA0 474 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 IZUMO3Q5VZ72 239 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 LCN10Q6JVE6 187 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 APTXQ7Z2E3 356 aaKnown RBP14.36□□□□□ -0.11
PNKP-218ENST00000625299 KMT5CQ86Y97 462 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 TICAM1Q8IUC6 712 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 IQCKQ8N0W5 287 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 SLC38A9Q8NBW4 561 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 ADAMTS17Q8TE56 1095 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 SNRNP40Q96DI7 357 aaKnown RBP14.36□□□□□ -0.11
PNKP-218ENST00000625299 TSGA13Q96PP4 275 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 PHF12Q96QT6 1004 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 TUBB2BQ9BVA1 445 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 CEP41Q9BYV8 373 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 KCND1Q9NSA2 647 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 IMP3Q9NV31 184 aaKnown RBP14.36□□□□□ -0.11
PNKP-218ENST00000625299 ASF1BQ9NVP2 202 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 SEMA5BQ9P283 1151 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 IP6K2Q9UHH9 426 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 SPTBP11277 2137 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 WIPF3A6NGB9 483 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 BPIP17213 487 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 MX2P20592 715 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 ARCN1P48444 511 aaKnown RBP14.35□□□□□ -0.11
PNKP-218ENST00000625299 VAV2P52735 878 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 GSDMDP57764 484 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 GBE1Q04446 702 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 CDK18Q07002 472 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 ATP1A4Q13733 1029 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 RPE65Q16518 533 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 ZRANB3Q5FWF4 1079 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 TMTC4Q5T4D3 741 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 CCDC183Q5T5S1 534 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 C1QL3Q5VWW1 255 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 ARMC6Q6NXE6 501 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 FBXO38Q6PIJ6 1188 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 TMC3Q7Z5M5 1100 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 C11orf96Q7Z7L8 435 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 HPS6Q86YV9 775 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 D2HGDHQ8N465 521 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 CISD2Q8N5K1 135 aaKnown RBP14.35□□□□□ -0.11
PNKP-218ENST00000625299 KCTD6Q8NC69 237 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 FATE1Q969F0 183 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 ZNF501Q96CX3 271 aaPredicted RBP14.35□□□□□ -0.11
PNKP-218ENST00000625299 CLIP3Q96DZ5 547 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 TTC25Q96NG3 672 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 CD180Q99467 661 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 TLR10Q9BXR5 811 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 BPIFA1Q9NP55 256 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 HRASLS2Q9NWW9 162 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 TCFL5Q9UL49 500 aa14.35□□□□□ -0.11
PNKP-218ENST00000625299 CFAP20Q9Y6A4 193 aaKnown RBP14.35□□□□□ -0.11
PNKP-218ENST00000625299 OR5K3A6NET4 321 aa14.34□□□□□ -0.11
PNKP-218ENST00000625299 ANKUB1A6NFN9 424 aa14.34□□□□□ -0.11
PNKP-218ENST00000625299 MEN1O00255 615 aa14.34□□□□□ -0.11
PNKP-218ENST00000625299 CBX6O95503 412 aa14.34□□□□□ -0.11
PNKP-218ENST00000625299 PBLDP30039 288 aaPredicted RBP14.34□□□□□ -0.11
PNKP-218ENST00000625299 RRADP55042 308 aa14.34□□□□□ -0.11
PNKP-218ENST00000625299 TMEM115Q12893 351 aaPredicted RBP14.34□□□□□ -0.11
PNKP-218ENST00000625299 ZBTB17Q13105 803 aa14.34□□□□□ -0.11
PNKP-218ENST00000625299 XRCC4Q13426 336 aa14.34□□□□□ -0.11
PNKP-218ENST00000625299 HADHQ16836 314 aaKnown RBP14.34□□□□□ -0.11
PNKP-218ENST00000625299 PLEKHN1Q494U1 663 aaPredicted RBP14.34□□□□□ -0.11
PNKP-218ENST00000625299 ATP13A5Q4VNC0 1218 aa14.34□□□□□ -0.11
PNKP-218ENST00000625299 ATP13A4Q4VNC1 1196 aa14.34□□□□□ -0.11
PNKP-218ENST00000625299 DUS1LQ6P1R4 473 aaKnown RBP14.34□□□□□ -0.11
PNKP-218ENST00000625299 MED25Q71SY5 747 aa14.34□□□□□ -0.11
PNKP-218ENST00000625299 AMZ2Q86W34 360 aa14.34□□□□□ -0.11
PNKP-218ENST00000625299 OOSP2Q86WS3 158 aa14.34□□□□□ -0.11
PNKP-218ENST00000625299 DSELQ8IZU8 1212 aa14.34□□□□□ -0.11
PNKP-218ENST00000625299 ZBTB2Q8N680 514 aa14.34□□□□□ -0.11
PNKP-218ENST00000625299 NIPA2Q8N8Q9 360 aa14.34□□□□□ -0.11
PNKP-218ENST00000625299 TMEM102Q8N9M5 508 aaPredicted RBP14.34□□□□□ -0.11
PNKP-218ENST00000625299 CPT1BQ92523 772 aa14.34□□□□□ -0.11
PNKP-218ENST00000625299 SGSM3Q96HU1 749 aa14.34□□□□□ -0.11
PNKP-218ENST00000625299 ZNF830Q96NB3 372 aaPredicted RBP14.34□□□□□ -0.11
PNKP-218ENST00000625299 THAP2Q9H0W7 228 aa14.34□□□□□ -0.11
PNKP-218ENST00000625299 ISCUQ9H1K1 167 aa14.34□□□□□ -0.11
PNKP-218ENST00000625299 FANCEQ9HB96 536 aa14.34□□□□□ -0.11
PNKP-218ENST00000625299 MAGEE1Q9HCI5 957 aa14.34□□□□□ -0.11
PNKP-218ENST00000625299 NFKBIL1Q9UBC1 381 aaPredicted RBP14.34□□□□□ -0.11
PNKP-218ENST00000625299 TMPRSS11EQ9UL52 423 aa14.34□□□□□ -0.11
PNKP-218ENST00000625299 PIKFYVEQ9Y2I7 2098 aa14.34□□□□□ -0.11
PNKP-218ENST00000625299 ANKRD17O75179 2603 aaKnown RBP14.33□□□□□ -0.11
PNKP-218ENST00000625299 LRRC10BA6NIK2 292 aa14.33□□□□□ -0.12
PNKP-218ENST00000625299 AURKAO14965 403 aa14.33□□□□□ -0.12
PNKP-218ENST00000625299 LCA5LO95447 670 aa14.33□□□□□ -0.12
PNKP-218ENST00000625299 ZBTB11O95625 1053 aaPredicted RBP14.33□□□□□ -0.12
PNKP-218ENST00000625299 RAB40ALP0C0E4 278 aa14.33□□□□□ -0.12
PNKP-218ENST00000625299 ATXN8OSP0DMR3 200 aa14.33□□□□□ -0.12
PNKP-218ENST00000625299 PRKCIP41743 596 aa14.33□□□□□ -0.12
PNKP-218ENST00000625299 ARSEP51690 589 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 646.6 ms