RNA–Protein interactions for RNA: ENST00000622963.3

SNHG5-213, Transcript of small nucleolar RNA host gene 5, human

TSL 5 BASIC

Gene SNHG5, Length 753 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG5-213	ENST00000622963	VWA5B1	Q5TIE3	1220 aa		11.43	□□□□□ -0.58
SNHG5-213	ENST00000622963	SPOCD1	Q6ZMY3	1216 aa		11.43	□□□□□ -0.58
SNHG5-213	ENST00000622963	HPS6	Q86YV9	775 aa		11.43	□□□□□ -0.58
SNHG5-213	ENST00000622963	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
SNHG5-213	ENST00000622963	AVL9	Q8NBF6	648 aa		11.43	□□□□□ -0.58
SNHG5-213	ENST00000622963	ZNF501	Q96CX3	271 aa	Predicted RBP	11.43	□□□□□ -0.58
SNHG5-213	ENST00000622963	ZDHHC12	Q96GR4	267 aa		11.43	□□□□□ -0.58
SNHG5-213	ENST00000622963	POM121	Q96HA1	1249 aa		11.43	□□□□□ -0.58
SNHG5-213	ENST00000622963	FCRL4	Q96PJ5	515 aa		11.43	□□□□□ -0.58
SNHG5-213	ENST00000622963	TDRD1	Q9BXT4	1180 aa	Known RBP	11.43	□□□□□ -0.58
SNHG5-213	ENST00000622963	RAB33B	Q9H082	229 aa		11.43	□□□□□ -0.58
SNHG5-213	ENST00000622963	NLRC4	Q9NPP4	1024 aa		11.43	□□□□□ -0.58
SNHG5-213	ENST00000622963	POT1	Q9NUX5	634 aa		11.43	□□□□□ -0.58
SNHG5-213	ENST00000622963	TAS2R14	Q9NYV8	317 aa		11.43	□□□□□ -0.58
SNHG5-213	ENST00000622963	ITGB1BP2	Q9UKP3	347 aa		11.43	□□□□□ -0.58
SNHG5-213	ENST00000622963	OSGIN2	Q9Y236	505 aa		11.43	□□□□□ -0.58
SNHG5-213	ENST00000622963	COPG1	Q9Y678	874 aa	Known RBP	11.43	□□□□□ -0.58
SNHG5-213	ENST00000622963	SPTB	P11277	2137 aa		11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	TACC2	O95359	2948 aa		11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	CHUK	O15111	745 aa		11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	JCHAIN	P01591	159 aa		11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	TCF4	P15884	667 aa		11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	ZNF7	P17097	686 aa	Predicted RBP	11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	IL1R2	P27930	398 aa		11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	MIP	P30301	263 aa		11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	FOXL2	P58012	376 aa		11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	POLR2F	P61218	127 aa	Known RBP	11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	ACY1	Q03154	408 aa		11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	ELOA	Q14241	798 aa	Known RBP	11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	LLGL1	Q15334	1064 aa		11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	TESK1	Q15569	626 aa		11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	KYNU	Q16719	465 aa		11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	INSC	Q1MX18	579 aa		11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	ZXDC	Q2QGD7	858 aa	Predicted RBP	11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	TDRD12	Q587J7	1177 aa	Known RBP	11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	ABRAXAS1	Q6UWZ7	409 aa		11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	C11orf96	Q7Z7L8	435 aa		11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	KCNMB4	Q86W47	210 aa		11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	TMEM126B	Q8IUX1	230 aa		11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	DSEL	Q8IZU8	1212 aa		11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	D2HGDH	Q8N465	521 aa		11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	TMEM102	Q8N9M5	508 aa	Predicted RBP	11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	ST6GALNAC3	Q8NDV1	305 aa		11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	LPCAT1	Q8NF37	534 aa		11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	FAM83D	Q9H4H8	585 aa		11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	ZNF552	Q9H707	407 aa	Predicted RBP	11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	PCNX1	Q96RV3	2341 aa		11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	PKDREJ	Q9NTG1	2253 aa		11.42	□□□□□ -0.58
SNHG5-213	ENST00000622963	MDC1	Q14676	2089 aa	Known RBP	11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	MEN1	O00255	615 aa		11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	PES1	O00541	588 aa	Known RBP	11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	RAB40AL	P0C0E4	278 aa		11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	PSMA2	P25787	234 aa		11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	NIPAL4	Q0D2K0	466 aa		11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	PTCHD3	Q3KNS1	767 aa		11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	ZNF789	Q5FWF6	425 aa		11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	RALGPS1	Q5JS13	557 aa		11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	ALS2CL	Q60I27	953 aa		11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	HGSNAT	Q68CP4	663 aa		11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963		Q6ZS92	163 aa		11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	MED25	Q71SY5	747 aa		11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	MRGPRE	Q86SM8	312 aa		11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	MCOLN2	Q8IZK6	566 aa		11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	TTC30B	Q8N4P2	665 aa		11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	TEX26	Q8N6G2	289 aa		11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	LRRN4	Q8WUT4	740 aa		11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	UBXN4	Q92575	508 aa		11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	LYSMD1	Q96S90	227 aa		11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	NLN	Q9BYT8	704 aa		11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	ILKAP	Q9H0C8	392 aa	Predicted RBP	11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	SAMSN1	Q9NSI8	373 aa	Known RBP	11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	PCMTD2	Q9NV79	361 aa		11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	TAB2	Q9NYJ8	693 aa		11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	C5AR2	Q9P296	337 aa		11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	TMPRSS11E	Q9UL52	423 aa		11.41	□□□□□ -0.58
SNHG5-213	ENST00000622963	PIKFYVE	Q9Y2I7	2098 aa		11.4	□□□□□ -0.58
SNHG5-213	ENST00000622963	C1orf232	A0A0U1RR37	186 aa		11.4	□□□□□ -0.58
SNHG5-213	ENST00000622963	EIF3CL	B5ME19	914 aa	Known RBP	11.4	□□□□□ -0.58
SNHG5-213	ENST00000622963	CFAP99	D6REC4	459 aa		11.4	□□□□□ -0.58
SNHG5-213	ENST00000622963	DIAPH2	O60879	1101 aa		11.4	□□□□□ -0.58
SNHG5-213	ENST00000622963	MTA2	O94776	668 aa		11.4	□□□□□ -0.58
SNHG5-213	ENST00000622963	SNRPB2	P08579	225 aa	Known RBP	11.4	□□□□□ -0.58
SNHG5-213	ENST00000622963	GLRB	P48167	497 aa		11.4	□□□□□ -0.58
SNHG5-213	ENST00000622963	ARCN1	P48444	511 aa	Known RBP	11.4	□□□□□ -0.58
SNHG5-213	ENST00000622963	HCAR3	P49019	387 aa		11.4	□□□□□ -0.58
SNHG5-213	ENST00000622963	EPHB1	P54762	984 aa		11.4	□□□□□ -0.58
SNHG5-213	ENST00000622963	TUBB4B	P68371	445 aa		11.4	□□□□□ -0.58
SNHG5-213	ENST00000622963	PDE1B	Q01064	536 aa		11.4	□□□□□ -0.58
SNHG5-213	ENST00000622963	MAMLD1	Q13495	774 aa		11.4	□□□□□ -0.58
SNHG5-213	ENST00000622963	TUBB2A	Q13885	445 aa		11.4	□□□□□ -0.58
SNHG5-213	ENST00000622963	CAMK4	Q16566	473 aa		11.4	□□□□□ -0.58
SNHG5-213	ENST00000622963	QPCT	Q16769	361 aa		11.4	□□□□□ -0.58
SNHG5-213	ENST00000622963	C4orf48	Q5BLP8	95 aa		11.4	□□□□□ -0.58
SNHG5-213	ENST00000622963	MARC1	Q5VT66	337 aa		11.4	□□□□□ -0.58
SNHG5-213	ENST00000622963	ALG1L	Q6GMV1	187 aa		11.4	□□□□□ -0.58
SNHG5-213	ENST00000622963	DCUN1D2	Q6PH85	259 aa		11.4	□□□□□ -0.58
SNHG5-213	ENST00000622963	IGFL3	Q6UXB1	125 aa		11.4	□□□□□ -0.58
SNHG5-213	ENST00000622963	ATPAF2	Q8N5M1	289 aa		11.4	□□□□□ -0.58
SNHG5-213	ENST00000622963	GPR26	Q8NDV2	337 aa		11.4	□□□□□ -0.58
SNHG5-213	ENST00000622963	ARRDC2	Q8TBH0	407 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms