RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 PARGQ86W56 976 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 DCAKDQ8WVC6 231 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 MRRFQ96E11 262 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 PDXPQ96GD0 296 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 VPS39Q96JC1 886 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 DNAAF2Q9NVR5 837 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 PLAAQ9Y263 795 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 NFS1Q9Y697 457 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 IKBKGQ9Y6K9 419 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 DGKBQ9Y6T7 804 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 DCHS1Q96JQ0 3298 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 FAM155BO75949 473 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 OR56A5P0C7T3 313 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 ABCG1P45844 678 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 SERPINB9P50453 376 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 SRP54P61011 504 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 EIF2B5Q13144 721 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 CASP8Q14790 479 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 ZNF423Q2M1K9 1284 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 KCTD16Q68DU8 428 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 TMEM220Q6QAJ8 160 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 ADGRD1Q6QNK2 874 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 TDRPQ86YL5 185 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 TRAPPC5Q8IUR0 188 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 ZNF547Q8IVP9 402 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 CNPY4Q8N129 248 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 OR2W6PQ8NHA6 318 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 LINC00615Q96LM1 132 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 AARSD1Q9BTE6 412 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 TMEM109Q9BVC6 243 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 ROPN1BQ9BZX4 212 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 CCDC68Q9H2F9 335 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 ROPN1Q9HAT0 212 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 MRPL40Q9NQ50 206 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 PNMA8BQ9ULN7 279 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 SUFUQ9UMX1 484 aa19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 PCYT1BQ9Y5K3 369 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-221ENST00000622702 OR2AG2A6NM03 316 aa19.53■□□□□ 0.72
PDLIM2-221ENST00000622702 GRID2O43424 1007 aa19.53■□□□□ 0.72
PDLIM2-221ENST00000622702 PPARDQ03181 441 aa19.53■□□□□ 0.72
PDLIM2-221ENST00000622702 IFFO1Q0D2I5 559 aa19.53■□□□□ 0.72
PDLIM2-221ENST00000622702 PYCR3Q53H96 274 aa19.53■□□□□ 0.72
PDLIM2-221ENST00000622702 PTRHD1Q6GMV3 140 aaKnown RBP19.53■□□□□ 0.72
PDLIM2-221ENST00000622702 LRRTM4Q86VH4 590 aa19.53■□□□□ 0.72
PDLIM2-221ENST00000622702 GALNT13Q8IUC8 556 aa19.53■□□□□ 0.72
PDLIM2-221ENST00000622702 NAT14Q8WUY8 206 aa19.53■□□□□ 0.72
PDLIM2-221ENST00000622702 ANKRD7Q92527 254 aa19.53■□□□□ 0.72
PDLIM2-221ENST00000622702 TSACCQ96A04 125 aaPredicted RBP19.53■□□□□ 0.72
PDLIM2-221ENST00000622702 GPR22Q99680 433 aa19.53■□□□□ 0.72
PDLIM2-221ENST00000622702 ERVMER34-1Q9H9K5 563 aa19.53■□□□□ 0.72
PDLIM2-221ENST00000622702 CYP4F12Q9HCS2 524 aa19.53■□□□□ 0.72
PDLIM2-221ENST00000622702 DLL3Q9NYJ7 618 aa19.53■□□□□ 0.72
PDLIM2-221ENST00000622702 DNMT3AQ9Y6K1 912 aaPredicted RBP19.53■□□□□ 0.72
PDLIM2-221ENST00000622702 RASGRP1O95267 797 aa19.52■□□□□ 0.72
PDLIM2-221ENST00000622702 FTH1P02794 183 aa19.52■□□□□ 0.72
PDLIM2-221ENST00000622702 ITGA2BP08514 1039 aa19.52■□□□□ 0.72
PDLIM2-221ENST00000622702 GSTM1P09488 218 aa19.52■□□□□ 0.72
PDLIM2-221ENST00000622702 CD9P21926 228 aa19.52■□□□□ 0.72
PDLIM2-221ENST00000622702 CNTFP26441 200 aa19.52■□□□□ 0.72
PDLIM2-221ENST00000622702 HK3P52790 923 aa19.52■□□□□ 0.72
PDLIM2-221ENST00000622702 GSTM4Q03013 218 aa19.52■□□□□ 0.72
PDLIM2-221ENST00000622702 RBM20Q5T481 1227 aaKnown RBP19.52■□□□□ 0.72
PDLIM2-221ENST00000622702 FAM45BPQ6NSW5 357 aa19.52■□□□□ 0.72
PDLIM2-221ENST00000622702 LRIG3Q6UXM1 1119 aa19.52■□□□□ 0.72
PDLIM2-221ENST00000622702 TAOK1Q7L7X3 1001 aa19.52■□□□□ 0.72
PDLIM2-221ENST00000622702 C11orf96Q7Z7L8 435 aa19.52■□□□□ 0.72
PDLIM2-221ENST00000622702 FAM45AQ8TCE6 357 aa19.52■□□□□ 0.72
PDLIM2-221ENST00000622702 KCNJ9Q92806 393 aa19.52■□□□□ 0.72
PDLIM2-221ENST00000622702 ATXN7L3BQ96GX2 97 aa19.52■□□□□ 0.72
PDLIM2-221ENST00000622702 PANX3Q96QZ0 392 aa19.52■□□□□ 0.72
PDLIM2-221ENST00000622702 ELF4Q99607 663 aaPredicted RBP19.52■□□□□ 0.72
PDLIM2-221ENST00000622702 CARS2Q9HA77 564 aaKnown RBP19.52■□□□□ 0.72
PDLIM2-221ENST00000622702 TM7SF3Q9NS93 570 aa19.52■□□□□ 0.72
PDLIM2-221ENST00000622702 PSMC3IPQ9P2W1 217 aaPredicted RBP19.52■□□□□ 0.72
PDLIM2-221ENST00000622702 MOSPD1Q9UJG1 213 aa19.52■□□□□ 0.72
PDLIM2-221ENST00000622702 MED16Q9Y2X0 877 aa19.52■□□□□ 0.72
PDLIM2-221ENST00000622702 FAM95CA0A1B0GW59 222 aa19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 KLHL33A6NCF5 533 aa19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 KMOO15229 486 aa19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 DFNA5O60443 496 aa19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 CDH16O75309 829 aa19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 NIPSNAP2O75323 286 aa19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 KRT38O76015 456 aa19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 CSF2P04141 144 aa19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 NME1P15531 152 aaKnown RBP19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 ID4P47928 161 aa19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 BLKP51451 505 aa19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 CRTC3Q6UUV7 619 aa19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 HID1Q8IV36 788 aa19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 OXR1Q8N573 874 aa19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 GPATCH11Q8N954 259 aa19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 ZIM3Q96PE6 472 aa19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 OR2M4Q96R27 311 aa19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 NDNQ99608 321 aa19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 RTKNQ9BST9 563 aa19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 TSSK1BQ9BXA7 367 aa19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 TRNAU1APQ9NX07 287 aaKnown RBP19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 EURLQ9NYK6 297 aa19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 ZNHIT2Q9UHR6 403 aa19.51■□□□□ 0.71
PDLIM2-221ENST00000622702 MTO1Q9Y2Z2 717 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms