RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 GJA5P36382 358 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 RPL38P63173 70 aaKnown RBP4.99□□□□□ -1.61
VPS13D-214ENST00000620676 CMPK2Q5EBM0 449 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 ERMP1Q7Z2K6 904 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 CPSF7Q8N684 471 aaKnown RBP4.99□□□□□ -1.61
VPS13D-214ENST00000620676 C12orf66Q96MD2 445 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 FRMD8P1Q9BZ68 369 aaPredicted RBP4.99□□□□□ -1.61
VPS13D-214ENST00000620676 ERVMER34-1Q9H9K5 563 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 CPSF4LA6NMK7 179 aaKnown RBP4.99□□□□□ -1.61
VPS13D-214ENST00000620676 M0R129 80 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF197O14709 1029 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 PDPK1O15530 556 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 SLC2A3P11169 496 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 YBX3P16989 372 aaKnown RBP eCLIP4.99□□□□□ -1.615e-8■■□□□ 14.5
VPS13D-214ENST00000620676 KLRC2P26717 231 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 PDE12Q6L8Q7 609 aaKnown RBP4.99□□□□□ -1.61
VPS13D-214ENST00000620676 GPRIN3Q6ZVF9 776 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 AADATQ8N5Z0 425 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 BHLHE41Q9C0J9 482 aaPredicted RBP4.99□□□□□ -1.61
VPS13D-214ENST00000620676 ABCC3O15438 1527 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 TRAV19A0A0A6YYK7 116 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 TVP23AA6NH52 213 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 M0QZ92 97 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 TOR1AO14656 332 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 SLITRK5O94991 958 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 PRDX6P30041 224 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 IDUAP35475 653 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF135P52742 658 aaPredicted RBP4.99□□□□□ -1.61
VPS13D-214ENST00000620676 GINS1Q14691 196 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 PRR5LQ6MZQ0 368 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 ULK3Q6PHR2 472 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 MKL1Q969V6 931 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 C17orf62Q9BQA9 187 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 RIOX1Q9H6W3 641 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 SIX2Q9NPC8 291 aa4.99□□□□□ -1.61
VPS13D-214ENST00000620676 SLC28A1O00337 649 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 ARHGEF15O94989 841 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 CDKN2BP42772 138 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 MAGEA11P43364 429 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 VPS72Q15906 364 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 HKDC1Q2TB90 917 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 LINC00523Q86TU6 105 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 BPHLQ86WA6 291 aaPredicted RBP4.98□□□□□ -1.61
VPS13D-214ENST00000620676 GPR63Q9BZJ6 419 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 TCAF1Q9Y4C2 921 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 ADIGQ0VDE8 80 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 FAM187BQ17R55 369 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 PCID2Q5JVF3 399 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 BCL2L15Q5TBC7 163 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 TDRD10Q5VZ19 366 aaKnown RBP4.98□□□□□ -1.61
VPS13D-214ENST00000620676 FSTL4Q6MZW2 842 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 NANOGP8Q6NSW7 305 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 EPGNQ6UW88 154 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 MACC1Q6ZN28 852 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 OR4A15Q8NGL6 344 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 DDX1Q92499 740 aaKnown RBP4.98□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF347Q96SE7 839 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF416Q9BWM5 594 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 UNKLQ9H9P5 680 aaKnown RBP4.98□□□□□ -1.61
VPS13D-214ENST00000620676 SCUBE2Q9NQ36 999 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 SIGLEC16A6NMB1 481 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 M0R233 179 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 PSMD3O43242 534 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 KIAA0513O60268 411 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 TMBIM6P55061 237 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 NOXA1Q86UR1 476 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 ZFP41Q8N8Y5 198 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 ACOT12Q8WYK0 555 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 CYTH4Q9UIA0 394 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 PCDHGB6Q9Y5F9 930 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 NRKQ7Z2Y5 1582 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 ZBTB14O43829 449 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 VPS4BO75351 444 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 ULK1O75385 1050 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 GLAP06280 429 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 RAB10P61026 200 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 EIF2S3LQ2VIR3 472 aaKnown RBP4.98□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF404Q494X3 552 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 KRBOX4Q5JUW0 171 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 PIK3R6Q5UE93 754 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 GLCCI1Q86VQ1 547 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 MAFIPQ8WZ33 124 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 RPL3LQ92901 407 aaKnown RBP4.98□□□□□ -1.61
VPS13D-214ENST00000620676 COQ10AQ96MF6 247 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 TBX5Q99593 518 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 DSN1Q9H410 356 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 SLA2Q9H6Q3 261 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 PCDHGA6Q9Y5G7 932 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 POU4F2Q12837 409 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 GALNT3Q14435 633 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 NARFLQ9H6Q4 476 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 MGAT4DA6NG13 374 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 HOXC6P09630 235 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 DALRD3Q5D0E6 543 aaKnown RBP4.98□□□□□ -1.61
VPS13D-214ENST00000620676 CHPT1Q8WUD6 406 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 NLKQ9UBE8 527 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 GSTK1Q9Y2Q3 226 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 SPIN1Q9Y657 262 aaPredicted RBP4.98□□□□□ -1.61
VPS13D-214ENST00000620676 GMFGO60234 142 aa4.98□□□□□ -1.61
VPS13D-214ENST00000620676 OR10H3O60404 316 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms