RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 UBL4BQ8N7F7 174 aa16.85■□□□□ 0.29
HMGN3-203ENST00000620514 FAM71DQ8N9W8 422 aa16.85■□□□□ 0.29
HMGN3-203ENST00000620514 OR13C4Q8NGS5 318 aa16.85■□□□□ 0.29
HMGN3-203ENST00000620514 NKD1Q969G9 470 aa16.85■□□□□ 0.29
HMGN3-203ENST00000620514 CXorf40BQ96DE9 158 aa16.85■□□□□ 0.29
HMGN3-203ENST00000620514 SGF29Q96ES7 293 aa16.85■□□□□ 0.29
HMGN3-203ENST00000620514 TBL1YQ9BQ87 522 aa16.85■□□□□ 0.29
HMGN3-203ENST00000620514 ZCCHC2Q9C0B9 1178 aaKnown RBP16.85■□□□□ 0.29
HMGN3-203ENST00000620514 APMAPQ9HDC9 416 aa16.85■□□□□ 0.29
HMGN3-203ENST00000620514 SLC40A1Q9NP59 571 aa16.85■□□□□ 0.29
HMGN3-203ENST00000620514 POT1Q9NUX5 634 aa16.85■□□□□ 0.29
HMGN3-203ENST00000620514 PCDHGA4Q9Y5G9 962 aa16.85■□□□□ 0.29
HMGN3-203ENST00000620514 MN1Q10571 1320 aaPredicted RBP16.85■□□□□ 0.29
HMGN3-203ENST00000620514 C5orf60A6NFR6 353 aa16.84■□□□□ 0.29
HMGN3-203ENST00000620514 MIF4GDA9UHW6 222 aaKnown RBP16.84■□□□□ 0.29
HMGN3-203ENST00000620514 CCL22O00626 93 aa16.84■□□□□ 0.29
HMGN3-203ENST00000620514 SRP72O76094 671 aaKnown RBP16.84■□□□□ 0.29
HMGN3-203ENST00000620514 METTL18O95568 372 aa16.84■□□□□ 0.29
HMGN3-203ENST00000620514 C9P02748 559 aa16.84■□□□□ 0.29
HMGN3-203ENST00000620514 PTMAP06454 111 aaKnown RBP16.84■□□□□ 0.29
HMGN3-203ENST00000620514 AMD1P17707 334 aa16.84■□□□□ 0.29
HMGN3-203ENST00000620514 MSH3P20585 1137 aa16.84■□□□□ 0.29
HMGN3-203ENST00000620514 AKT1P31749 480 aa16.84■□□□□ 0.29
HMGN3-203ENST00000620514 LEPRP48357 1165 aaKnown RBP16.84■□□□□ 0.29
HMGN3-203ENST00000620514 GDF10P55107 478 aa16.84■□□□□ 0.29
HMGN3-203ENST00000620514 XIAPP98170 497 aa16.84■□□□□ 0.29
HMGN3-203ENST00000620514 DMPKQ09013 629 aa16.84■□□□□ 0.29
HMGN3-203ENST00000620514 KLF1Q13351 362 aaPredicted RBP16.84■□□□□ 0.29
HMGN3-203ENST00000620514 GPR18Q14330 331 aa16.84■□□□□ 0.29
HMGN3-203ENST00000620514 NFE2L1Q14494 772 aa16.84■□□□□ 0.29
HMGN3-203ENST00000620514 FNBP1LQ5T0N5 605 aa16.84■□□□□ 0.29
HMGN3-203ENST00000620514 DCAF12Q5T6F0 453 aa16.84■□□□□ 0.29
HMGN3-203ENST00000620514 PLXDC1Q8IUK5 500 aa16.84■□□□□ 0.29
HMGN3-203ENST00000620514 KLHDC8BQ8IXV7 354 aa16.84■□□□□ 0.29
HMGN3-203ENST00000620514 BEND7Q8N7W2 519 aaPredicted RBP16.84■□□□□ 0.29
HMGN3-203ENST00000620514 GPR150Q8NGU9 434 aa16.84■□□□□ 0.29
HMGN3-203ENST00000620514 RSC1A1Q92681 617 aa16.84■□□□□ 0.29
HMGN3-203ENST00000620514 RTP4Q96DX8 246 aa16.84■□□□□ 0.29
HMGN3-203ENST00000620514 C9orf72Q96LT7 481 aa16.84■□□□□ 0.29
HMGN3-203ENST00000620514 TGM7Q96PF1 710 aa16.84■□□□□ 0.29
HMGN3-203ENST00000620514 ASB8Q9H765 288 aa16.84■□□□□ 0.29
HMGN3-203ENST00000620514 PSMD13Q9UNM6 376 aa16.84■□□□□ 0.29
HMGN3-203ENST00000620514 ZNF106Q9H2Y7 1883 aaKnown RBP16.84■□□□□ 0.29
HMGN3-203ENST00000620514 ATMQ13315 3056 aa16.83■□□□□ 0.29
HMGN3-203ENST00000620514 GOLGA6L9A6NEM1 432 aa16.83■□□□□ 0.28
HMGN3-203ENST00000620514 CAPN5O15484 640 aaPredicted RBP16.83■□□□□ 0.28
HMGN3-203ENST00000620514 ZNF140P52738 457 aaPredicted RBP16.83■□□□□ 0.28
HMGN3-203ENST00000620514 RAB15P59190 212 aa16.83■□□□□ 0.28
HMGN3-203ENST00000620514 CYP4F2P78329 520 aa16.83■□□□□ 0.28
HMGN3-203ENST00000620514 RPE65Q16518 533 aa16.83■□□□□ 0.28
HMGN3-203ENST00000620514 KCTD11Q693B1 232 aa16.83■□□□□ 0.28
HMGN3-203ENST00000620514 ARHGEF18Q6ZSZ5 1173 aa16.83■□□□□ 0.28
HMGN3-203ENST00000620514 TAB3Q8N5C8 712 aaPredicted RBP16.83■□□□□ 0.28
HMGN3-203ENST00000620514 TTC13Q8NBP0 860 aa16.83■□□□□ 0.28
HMGN3-203ENST00000620514 HES6Q96HZ4 224 aa16.83■□□□□ 0.28
HMGN3-203ENST00000620514 ASPSCR1Q9BZE9 553 aa16.83■□□□□ 0.28
HMGN3-203ENST00000620514 FAM96AQ9H5X1 160 aa16.83■□□□□ 0.28
HMGN3-203ENST00000620514 KIF1CO43896 1103 aaKnown RBP16.82■□□□□ 0.28
HMGN3-203ENST00000620514 RAD1O60671 282 aa16.82■□□□□ 0.28
HMGN3-203ENST00000620514 KCNJ13O60928 360 aa16.82■□□□□ 0.28
HMGN3-203ENST00000620514 CRTAMO95727 393 aa16.82■□□□□ 0.28
HMGN3-203ENST00000620514 ANKRD34CP0C6C1 535 aa16.82■□□□□ 0.28
HMGN3-203ENST00000620514 TPH1P17752 444 aa16.82■□□□□ 0.28
HMGN3-203ENST00000620514 HALP42357 657 aa16.82■□□□□ 0.28
HMGN3-203ENST00000620514 ATP1A2P50993 1020 aa16.82■□□□□ 0.28
HMGN3-203ENST00000620514 LONRF2Q1L5Z9 754 aa16.82■□□□□ 0.28
HMGN3-203ENST00000620514 PARP6Q2NL67 630 aa16.82■□□□□ 0.28
HMGN3-203ENST00000620514 LINC00303Q3SY05 128 aa16.82■□□□□ 0.28
HMGN3-203ENST00000620514 XKR5Q6UX68 686 aa16.82■□□□□ 0.28
HMGN3-203ENST00000620514 CACNA2D3Q8IZS8 1091 aa16.82■□□□□ 0.28
HMGN3-203ENST00000620514 TXLNBQ8N3L3 684 aa16.82■□□□□ 0.28
HMGN3-203ENST00000620514 SLC35B2Q8TB61 432 aa16.82■□□□□ 0.28
HMGN3-203ENST00000620514 RNF31Q96EP0 1072 aa16.82■□□□□ 0.28
HMGN3-203ENST00000620514 TMEM121Q9BTD3 319 aa16.82■□□□□ 0.28
HMGN3-203ENST00000620514 SPRY4Q9C004 299 aa16.82■□□□□ 0.28
HMGN3-203ENST00000620514 ARNT2Q9HBZ2 717 aa16.82■□□□□ 0.28
HMGN3-203ENST00000620514 FBXO8Q9NRD0 319 aa16.82■□□□□ 0.28
HMGN3-203ENST00000620514 SIDT1Q9NXL6 827 aaKnown RBP16.82■□□□□ 0.28
HMGN3-203ENST00000620514 FAM8A1Q9UBU6 413 aa16.82■□□□□ 0.28
HMGN3-203ENST00000620514 CFAP20Q9Y6A4 193 aaKnown RBP16.82■□□□□ 0.28
HMGN3-203ENST00000620514 DNMT3AQ9Y6K1 912 aaPredicted RBP16.82■□□□□ 0.28
HMGN3-203ENST00000620514 KALRNO60229 2985 aa16.81■□□□□ 0.28
HMGN3-203ENST00000620514 LDB2O43679 373 aa16.81■□□□□ 0.28
HMGN3-203ENST00000620514 SGTAO43765 313 aa16.81■□□□□ 0.28
HMGN3-203ENST00000620514 LIFP15018 202 aa16.81■□□□□ 0.28
HMGN3-203ENST00000620514 CAPZBP47756 277 aa16.81■□□□□ 0.28
HMGN3-203ENST00000620514 SEPHS1P49903 392 aa16.81■□□□□ 0.28
HMGN3-203ENST00000620514 PPP1CAP62136 330 aa16.81■□□□□ 0.28
HMGN3-203ENST00000620514 DUS1LQ6P1R4 473 aaKnown RBP16.81■□□□□ 0.28
HMGN3-203ENST00000620514 CEACAM20Q6UY09 585 aa16.81■□□□□ 0.28
HMGN3-203ENST00000620514 TIPARPQ7Z3E1 657 aaKnown RBP16.81■□□□□ 0.28
HMGN3-203ENST00000620514 RBM12BQ8IXT5 1001 aaKnown RBP16.81■□□□□ 0.28
HMGN3-203ENST00000620514 IL22RA1Q8N6P7 574 aa16.81■□□□□ 0.28
HMGN3-203ENST00000620514 EXD3Q8N9H8 876 aa16.81■□□□□ 0.28
HMGN3-203ENST00000620514 ATG4AQ8WYN0 398 aa16.81■□□□□ 0.28
HMGN3-203ENST00000620514 EXTL1Q92935 676 aa16.81■□□□□ 0.28
HMGN3-203ENST00000620514 DNAJC1Q96KC8 554 aaKnown RBP16.81■□□□□ 0.28
HMGN3-203ENST00000620514 PPP1R2P1Q96PQ5 205 aa16.81■□□□□ 0.28
HMGN3-203ENST00000620514 TEFMQ96QE5 360 aaKnown RBP16.81■□□□□ 0.28
HMGN3-203ENST00000620514 WWP1Q9H0M0 922 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms