RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 NFKBIL1Q9UBC1 381 aaPredicted RBP5.2□□□□□ -1.58
SHMT1-211ENST00000618902 CTNNAL1Q9UBT7 734 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 SLC2A6Q9UGQ3 507 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 ASIC3Q9UHC3 531 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 FKBPLQ9UIM3 349 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 SLC12A4Q9UP95 1085 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 AAR2Q9Y312 384 aaKnown RBP5.2□□□□□ -1.58
SHMT1-211ENST00000618902 ST14Q9Y5Y6 855 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 RP1P56715 2156 aa5.2□□□□□ -1.58
SHMT1-211ENST00000618902 LRP4O75096 1905 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 PLXNB3Q9ULL4 1909 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 BOD1L1Q8NFC6 3051 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 CCDC78A2IDD5 438 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 MROH6A6NGR9 719 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 GOLGA8MH3BSY2 632 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 TM9SF1O15321 606 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 AQP9O43315 295 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 UGT1A9O60656 530 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 AVILO75366 819 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 RFPL3O75679 317 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 PIAS2O75928 621 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 WFS1O76024 890 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 ZWINTO95229 277 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 RASGRP1O95267 797 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 CEACAM5P06731 702 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 APRTP07741 180 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 GSTA2P09210 222 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 GIMD1P0DJR0 217 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 SLC2A4P14672 509 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 UGT1A6P19224 532 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 TPSB2P20231 275 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 UGT1A1P22309 533 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 UGT1A4P22310 534 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 ARNTP27540 789 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 STX2P32856 288 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 UGT1A3P35503 534 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 UGT1A5P35504 534 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 HMGCLP35914 325 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 MAGEA3P43357 314 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 CDKN1CP49918 316 aaPredicted RBP5.19□□□□□ -1.58
SHMT1-211ENST00000618902 CCNG1P51959 295 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 HK3P52790 923 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 SESN2P58004 480 aaPredicted RBP5.19□□□□□ -1.58
SHMT1-211ENST00000618902 DCDC1P59894 354 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 BASP1P80723 227 aaKnown RBP5.19□□□□□ -1.58
SHMT1-211ENST00000618902 PPARDQ03181 441 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 BNIP1Q12981 228 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 BNIP3Q12983 259 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 EIF3IQ13347 325 aaKnown RBP5.19□□□□□ -1.58
SHMT1-211ENST00000618902 LAMB3Q13751 1172 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 PRPSAP1Q14558 356 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 POU6F1Q14863 301 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 NFATC4Q14934 902 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 TPSAB1Q15661 275 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 CHRNA6Q15825 494 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 ALG11Q2TAA5 492 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 GALNTL6Q49A17 601 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 MSS51Q4VC12 460 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 ATP13A5Q4VNC0 1218 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 RNASEH2BQ5TBB1 312 aaKnown RBP5.19□□□□□ -1.58
SHMT1-211ENST00000618902 HIBCHQ6NVY1 386 aaPredicted RBP5.19□□□□□ -1.58
SHMT1-211ENST00000618902 PNCKQ6P2M8 343 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 CES3Q6UWW8 571 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 XKR5Q6UX68 686 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 ADAMTSL4Q6UY14 1074 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 GSTA5Q7RTV2 222 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 GLT6D1Q7Z4J2 308 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 HEATR4Q86WZ0 1026 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 IGDCC3Q8IVU1 814 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 SPNS2Q8IVW8 549 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 SFTPA2Q8IWL1 248 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 TRIM42Q8IWZ5 723 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 RBFAQ8N0V3 343 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 MPP5Q8N3R9 675 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 PAF1Q8N7H5 531 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 CCDC63Q8NA47 563 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 DEFB124Q8NES8 71 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 OR4K2Q8NGD2 314 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 NAT14Q8WUY8 206 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 INPP5DQ92835 1189 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 TSACCQ96A04 125 aaPredicted RBP5.19□□□□□ -1.58
SHMT1-211ENST00000618902 AP2M1Q96CW1 435 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 PDXPQ96GD0 296 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 SCARF2Q96GP6 870 aaPredicted RBP5.19□□□□□ -1.58
SHMT1-211ENST00000618902 COX14Q96I36 57 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 FSD1LQ9BXM9 530 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 TEX101Q9BY14 249 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 GPR63Q9BZJ6 419 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 TRIM31Q9BZY9 425 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 CLPBQ9H078 707 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 VPS11Q9H270 941 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 EPB41L4BQ9H329 900 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 EPB41L1Q9H4G0 881 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 WDR26Q9H7D7 661 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 SUDS3Q9H7L9 328 aaPredicted RBP5.19□□□□□ -1.58
SHMT1-211ENST00000618902 UGT1A7Q9HAW7 530 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 UGT1A10Q9HAW8 530 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 UGT1A8Q9HAW9 530 aa5.19□□□□□ -1.58
SHMT1-211ENST00000618902 MRPL40Q9NQ50 206 aaKnown RBP5.19□□□□□ -1.58
SHMT1-211ENST00000618902 SAR1AQ9NR31 198 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 235.6 ms