RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 LEUTXA8MZ59 168 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 RASGRP1O95267 797 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 PSAPP07602 524 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 CBX5P45973 191 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 RAD51Q06609 339 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 CNSTQ6PJW8 725 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 CHMP1BQ7LBR1 199 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 DYNC2LI1Q8TCX1 351 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 PTERQ96BW5 349 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 MAGEB10Q96LZ2 347 aaPredicted RBP12.14□□□□□ -0.47
MATR3-227ENST00000618441 RAVER2Q9HCJ3 691 aaKnown RBP12.14□□□□□ -0.47
MATR3-227ENST00000618441 ASNSD1Q9NWL6 643 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 KLHL8Q9P2G9 620 aaPredicted RBP12.14□□□□□ -0.47
MATR3-227ENST00000618441 OPTCQ9UBM4 332 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 TRAV19A0A0A6YYK7 116 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 SLCO1B7G3V0H7 640 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 KCNK1O00180 336 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 STX7O15400 261 aaKnown RBP12.13□□□□□ -0.47
MATR3-227ENST00000618441 PRKCGP05129 697 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 CHRM5P08912 532 aaPredicted RBP12.13□□□□□ -0.47
MATR3-227ENST00000618441 NR2C2P49116 596 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 STXBP2Q15833 593 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 CEP170P1Q96L14 293 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 FAM129BQ96TA1 746 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 SEC22CQ9BRL7 303 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 MAGEB5Q9BZ81 275 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 FBXO8Q9NRD0 319 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 RDH8Q9NYR8 311 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 USE1Q9NZ43 259 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.13□□□□□ -0.47
MATR3-227ENST00000618441 AQP12BA6NM10 295 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 DLX3O60479 287 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 HTR1AP08908 422 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 HAAOP46952 286 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 PTCHD3Q3KNS1 767 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 PYCR3Q53H96 274 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 YIF1BQ5BJH7 314 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 ARHGAP17Q68EM7 881 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 COMMD7Q86VX2 200 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 AQP12AQ8IXF9 295 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 CLYBLQ8N0X4 340 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 TTLQ8NG68 377 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 CDCA5Q96FF9 252 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 MYRFLQ96LU7 910 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 APOL4Q9BPW4 351 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 INTS10Q9NVR2 710 aaKnown RBP12.13□□□□□ -0.47
MATR3-227ENST00000618441 FAM118AQ9NWS6 357 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 FBXL12Q9NXK8 326 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 TPRKBQ9Y3C4 175 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 PNMA8CA0A1B0GUJ8 204 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 MITFO75030 526 aaPredicted RBP12.13□□□□□ -0.47
MATR3-227ENST00000618441 ERVFC1P60507 584 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 C1QTNF8P60827 252 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 RAB14P61106 215 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 MXD1Q05195 221 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 ERICH5Q6P6B1 374 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 LSMEM2Q8N112 164 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 ARFGAP1Q8N6T3 406 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 C2orf69Q8N8R5 385 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 PNPLA1Q8N8W4 532 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 ACER1Q8TDN7 264 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 SLC5A11Q8WWX8 675 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 ELMO2Q96JJ3 720 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 ZNF668Q96K58 619 aaPredicted RBP12.13□□□□□ -0.47
MATR3-227ENST00000618441 PPM1MQ96MI6 270 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 TRAF4Q9BUZ4 470 aaPredicted RBP12.13□□□□□ -0.47
MATR3-227ENST00000618441 STRA6Q9BX79 667 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 SLIRPQ9GZT3 109 aaKnown RBP12.13□□□□□ -0.47
MATR3-227ENST00000618441 SERHL2Q9H4I8 314 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 TRIM45Q9H8W5 580 aaPredicted RBP12.13□□□□□ -0.47
MATR3-227ENST00000618441 RAPGEFL1Q9UHV5 662 aa12.13□□□□□ -0.47
MATR3-227ENST00000618441 BCKDKO14874 412 aa12.12□□□□□ -0.47
MATR3-227ENST00000618441 GABARAPO95166 117 aa12.12□□□□□ -0.47
MATR3-227ENST00000618441 C1QAP02745 245 aa12.12□□□□□ -0.47
MATR3-227ENST00000618441 JUNBP17275 347 aaPredicted RBP12.12□□□□□ -0.47
MATR3-227ENST00000618441 GADD45AP24522 165 aa12.12□□□□□ -0.47
MATR3-227ENST00000618441 MYL9P24844 172 aa12.12□□□□□ -0.47
MATR3-227ENST00000618441 AP2S1P53680 142 aaPredicted RBP12.12□□□□□ -0.47
MATR3-227ENST00000618441 B2MP61769 119 aa12.12□□□□□ -0.47
MATR3-227ENST00000618441 ACOX1Q15067 660 aa12.12□□□□□ -0.47
MATR3-227ENST00000618441 PCBP1Q15365 356 aaKnown RBP eCLIP12.12□□□□□ -0.47
MATR3-227ENST00000618441 NFIL3Q16649 462 aa12.12□□□□□ -0.47
MATR3-227ENST00000618441 RBM23Q86U06 439 aaKnown RBP12.12□□□□□ -0.47
MATR3-227ENST00000618441 P3H2Q8IVL5 708 aa12.12□□□□□ -0.47
MATR3-227ENST00000618441 EMID1Q96A84 441 aaPredicted RBP12.12□□□□□ -0.47
MATR3-227ENST00000618441 CMTM6Q9NX76 183 aa12.12□□□□□ -0.47
MATR3-227ENST00000618441 WNK3Q9BYP7 1800 aa12.12□□□□□ -0.47
MATR3-227ENST00000618441 EFCAB10A6NFE3 127 aa12.12□□□□□ -0.47
MATR3-227ENST00000618441 PRMT5O14744 637 aaPredicted RBP12.12□□□□□ -0.47
MATR3-227ENST00000618441 B4GALT4O60513 344 aa12.12□□□□□ -0.47
MATR3-227ENST00000618441 PSMB4P28070 264 aa12.12□□□□□ -0.47
MATR3-227ENST00000618441 ALDH3A2P51648 485 aa12.12□□□□□ -0.47
MATR3-227ENST00000618441 ADARB1P78563 741 aaKnown RBP12.12□□□□□ -0.47
MATR3-227ENST00000618441 SLC25A11Q02978 314 aaKnown RBP12.12□□□□□ -0.47
MATR3-227ENST00000618441 QPRTQ15274 297 aa12.12□□□□□ -0.47
MATR3-227ENST00000618441 TRIM71Q2Q1W2 868 aaKnown RBP12.12□□□□□ -0.47
MATR3-227ENST00000618441 TIFABQ6ZNK6 161 aa12.12□□□□□ -0.47
MATR3-227ENST00000618441 CDKL3Q8IVW4 592 aaPredicted RBP12.12□□□□□ -0.47
MATR3-227ENST00000618441 OR5B17Q8NGF7 314 aa12.12□□□□□ -0.47
MATR3-227ENST00000618441 PHF10Q8WUB8 498 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms