RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 CA5AP35218 305 aa24.75■■□□□ 1.55
VEGFA-228ENST00000617771 HADHAP40939 763 aa24.75■■□□□ 1.55
VEGFA-228ENST00000617771 ATP1A2P50993 1020 aa24.75■■□□□ 1.55
VEGFA-228ENST00000617771 GSDMDP57764 484 aa24.75■■□□□ 1.55
VEGFA-228ENST00000617771 BMPERQ8N8U9 685 aa24.75■■□□□ 1.55
VEGFA-228ENST00000617771 UBE2Q2Q8WVN8 375 aa24.75■■□□□ 1.55
VEGFA-228ENST00000617771 PMEPA1Q969W9 287 aa24.75■■□□□ 1.55
VEGFA-228ENST00000617771 TEFMQ96QE5 360 aaKnown RBP24.75■■□□□ 1.55
VEGFA-228ENST00000617771 SLC40A1Q9NP59 571 aa24.75■■□□□ 1.55
VEGFA-228ENST00000617771 KCTD3Q9Y597 815 aa24.75■■□□□ 1.55
VEGFA-228ENST00000617771 KRT86O43790 486 aa24.74■■□□□ 1.55
VEGFA-228ENST00000617771 TYRP1P17643 537 aa24.74■■□□□ 1.55
VEGFA-228ENST00000617771 MC2RQ01718 297 aa24.74■■□□□ 1.55
VEGFA-228ENST00000617771 MSLNQ13421 630 aaPredicted RBP24.74■■□□□ 1.55
VEGFA-228ENST00000617771 SPARCL1Q14515 664 aa24.74■■□□□ 1.55
VEGFA-228ENST00000617771 CLCA4Q14CN2 919 aa24.74■■□□□ 1.55
VEGFA-228ENST00000617771 P3H1Q32P28 736 aa24.74■■□□□ 1.55
VEGFA-228ENST00000617771 FNBP1LQ5T0N5 605 aa24.74■■□□□ 1.55
VEGFA-228ENST00000617771 KIAA1614Q5VZ46 1190 aa24.74■■□□□ 1.55
VEGFA-228ENST00000617771 DENND5AQ6IQ26 1287 aa24.74■■□□□ 1.55
VEGFA-228ENST00000617771 PCSK4Q6UW60 755 aa24.74■■□□□ 1.55
VEGFA-228ENST00000617771 ZSCAN1Q8NBB4 408 aa24.74■■□□□ 1.55
VEGFA-228ENST00000617771 SLC35B2Q8TB61 432 aa24.74■■□□□ 1.55
VEGFA-228ENST00000617771 TTC9Q92623 222 aa24.74■■□□□ 1.55
VEGFA-228ENST00000617771 ULK4Q96C45 1275 aa24.74■■□□□ 1.55
VEGFA-228ENST00000617771 SGF29Q96ES7 293 aa24.74■■□□□ 1.55
VEGFA-228ENST00000617771 LRRC40Q9H9A6 602 aa24.74■■□□□ 1.55
VEGFA-228ENST00000617771 OGFRQ9NZT2 677 aa24.74■■□□□ 1.55
VEGFA-228ENST00000617771 CRLS1Q9UJA2 301 aa24.74■■□□□ 1.55
VEGFA-228ENST00000617771 WDR37Q9Y2I8 494 aa24.74■■□□□ 1.55
VEGFA-228ENST00000617771 R3HDM2Q9Y2K5 976 aaKnown RBP24.74■■□□□ 1.55
VEGFA-228ENST00000617771 SLC30A1Q9Y6M5 507 aa24.74■■□□□ 1.55
VEGFA-228ENST00000617771 KLHL33A6NCF5 533 aa24.73■■□□□ 1.55
VEGFA-228ENST00000617771 C9P02748 559 aa24.73■■□□□ 1.55
VEGFA-228ENST00000617771 PRB1P04280 392 aa24.73■■□□□ 1.55
VEGFA-228ENST00000617771 ANKRD34CP0C6C1 535 aa24.73■■□□□ 1.55
VEGFA-228ENST00000617771 RALBP11234 206 aa24.73■■□□□ 1.55
VEGFA-228ENST00000617771 ARSDP51689 593 aa24.73■■□□□ 1.55
VEGFA-228ENST00000617771 ZNF140P52738 457 aaPredicted RBP24.73■■□□□ 1.55
VEGFA-228ENST00000617771 XIAPP98170 497 aa24.73■■□□□ 1.55
VEGFA-228ENST00000617771 C19orf57Q0VDD7 668 aa24.73■■□□□ 1.55
VEGFA-228ENST00000617771 SRSF6Q13247 344 aaKnown RBP24.73■■□□□ 1.55
VEGFA-228ENST00000617771 SEL1L2Q5TEA6 688 aa24.73■■□□□ 1.55
VEGFA-228ENST00000617771 ANKS6Q68DC2 871 aa24.73■■□□□ 1.55
VEGFA-228ENST00000617771 CEACAM20Q6UY09 585 aa24.73■■□□□ 1.55
VEGFA-228ENST00000617771 DET1Q7L5Y6 550 aa24.73■■□□□ 1.55
VEGFA-228ENST00000617771 VASH2Q86V25 355 aa24.73■■□□□ 1.55
VEGFA-228ENST00000617771 OR13C4Q8NGS5 318 aa24.73■■□□□ 1.55
VEGFA-228ENST00000617771 DCUN1D1Q96GG9 259 aa24.73■■□□□ 1.55
VEGFA-228ENST00000617771 ZPBPQ9BS86 351 aa24.73■■□□□ 1.55
VEGFA-228ENST00000617771 TMEM121Q9BTD3 319 aa24.73■■□□□ 1.55
VEGFA-228ENST00000617771 PSMD3O43242 534 aa24.72■■□□□ 1.55
VEGFA-228ENST00000617771 ITGALP20701 1170 aa24.72■■□□□ 1.55
VEGFA-228ENST00000617771 PBLDP30039 288 aaPredicted RBP24.72■■□□□ 1.55
VEGFA-228ENST00000617771 GFERP55789 205 aa24.72■■□□□ 1.55
VEGFA-228ENST00000617771 TMPRSS15P98073 1019 aa24.72■■□□□ 1.55
VEGFA-228ENST00000617771 GPR18Q14330 331 aa24.72■■□□□ 1.55
VEGFA-228ENST00000617771 NFE2L1Q14494 772 aa24.72■■□□□ 1.55
VEGFA-228ENST00000617771 KCTD11Q693B1 232 aa24.72■■□□□ 1.55
VEGFA-228ENST00000617771 C9orf72Q96LT7 481 aa24.72■■□□□ 1.55
VEGFA-228ENST00000617771 FBXO8Q9NRD0 319 aa24.72■■□□□ 1.55
VEGFA-228ENST00000617771 GUCA1BQ9UMX6 200 aa24.72■■□□□ 1.55
VEGFA-228ENST00000617771 ZNF106Q9H2Y7 1883 aaKnown RBP24.72■■□□□ 1.55
VEGFA-228ENST00000617771 TCRBV7S2A1N4TA0A589 114 aa24.71■■□□□ 1.55
VEGFA-228ENST00000617771 MGAT4DA6NG13 374 aa24.71■■□□□ 1.55
VEGFA-228ENST00000617771 TOX3O15405 576 aaPredicted RBP24.71■■□□□ 1.55
VEGFA-228ENST00000617771 METTL18O95568 372 aa24.71■■□□□ 1.55
VEGFA-228ENST00000617771 CAPZBP47756 277 aa24.71■■□□□ 1.55
VEGFA-228ENST00000617771 RPE65Q16518 533 aa24.71■■□□□ 1.55
VEGFA-228ENST00000617771 FAM83HQ6ZRV2 1179 aaPredicted RBP24.71■■□□□ 1.55
VEGFA-228ENST00000617771 SNX20Q7Z614 316 aa24.71■■□□□ 1.55
VEGFA-228ENST00000617771 IL22RA1Q8N6P7 574 aa24.71■■□□□ 1.55
VEGFA-228ENST00000617771 BEND7Q8N7W2 519 aaPredicted RBP24.71■■□□□ 1.55
VEGFA-228ENST00000617771 HEXDCQ8WVB3 486 aa24.71■■□□□ 1.55
VEGFA-228ENST00000617771 JPH3Q8WXH2 748 aaPredicted RBP24.71■■□□□ 1.55
VEGFA-228ENST00000617771 NKD1Q969G9 470 aa24.71■■□□□ 1.55
VEGFA-228ENST00000617771 RTP4Q96DX8 246 aa24.71■■□□□ 1.55
VEGFA-228ENST00000617771 TGM7Q96PF1 710 aa24.71■■□□□ 1.55
VEGFA-228ENST00000617771 FRMD8P1Q9BZ68 369 aaPredicted RBP24.71■■□□□ 1.55
VEGFA-228ENST00000617771 PSMD13Q9UNM6 376 aa24.71■■□□□ 1.55
VEGFA-228ENST00000617771 AGAP14A8MT82 685 aa24.7■■□□□ 1.54
VEGFA-228ENST00000617771 CFAP99D6REC4 459 aa24.7■■□□□ 1.54
VEGFA-228ENST00000617771 CAPN5O15484 640 aaPredicted RBP24.7■■□□□ 1.54
VEGFA-228ENST00000617771 ARHGAP6O43182 974 aa24.7■■□□□ 1.54
VEGFA-228ENST00000617771 LDB2O43679 373 aa24.7■■□□□ 1.54
VEGFA-228ENST00000617771 GDF10P55107 478 aa24.7■■□□□ 1.54
VEGFA-228ENST00000617771 BCL7AQ4VC05 210 aa24.7■■□□□ 1.54
VEGFA-228ENST00000617771 METRNLQ641Q3 311 aa24.7■■□□□ 1.54
VEGFA-228ENST00000617771 OR2L2Q8NH16 312 aa24.7■■□□□ 1.54
VEGFA-228ENST00000617771 RSC1A1Q92681 617 aa24.7■■□□□ 1.54
VEGFA-228ENST00000617771 ZDHHC12Q96GR4 267 aa24.7■■□□□ 1.54
VEGFA-228ENST00000617771 ACSL5Q9ULC5 683 aa24.7■■□□□ 1.54
VEGFA-228ENST00000617771 PCDHGA4Q9Y5G9 962 aa24.7■■□□□ 1.54
VEGFA-228ENST00000617771 C1QL1O75973 258 aa24.69■■□□□ 1.54
VEGFA-228ENST00000617771 AP2A1O95782 977 aa24.69■■□□□ 1.54
VEGFA-228ENST00000617771 STIP1P31948 543 aaKnown RBP24.69■■□□□ 1.54
VEGFA-228ENST00000617771 GPR33Q49SQ1 333 aa24.69■■□□□ 1.54
VEGFA-228ENST00000617771 CACNA2D3Q8IZS8 1091 aa24.69■■□□□ 1.54
VEGFA-228ENST00000617771 NXPE1Q8N323 547 aa24.69■■□□□ 1.54
VEGFA-228ENST00000617771 DNAJC1Q96KC8 554 aaKnown RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms